Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 AL512598.1-201ENST00000610158 273 ntBASIC1.45□□□□□ -2.18
CCDC47Q96A33 RNU6-534P-201ENST00000364877 106 ntBASIC1.44□□□□□ -2.18
CCDC47Q96A33 MIR1253-201ENST00000408273 105 ntBASIC1.44□□□□□ -2.18
CCDC47Q96A33 RPL37P10-201ENST00000412884 288 ntBASIC1.44□□□□□ -2.18
CCDC47Q96A33 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.44□□□□□ -2.18
CCDC47Q96A33 MTCO2P16-201ENST00000436962 677 ntBASIC1.44□□□□□ -2.18
CCDC47Q96A33 TPT1P7-201ENST00000458300 517 ntBASIC1.44□□□□□ -2.18
CCDC47Q96A33 RNU7-57P-201ENST00000459540 60 ntBASIC1.44□□□□□ -2.18
CCDC47Q96A33 MTCYBP18-201ENST00000501056 747 ntBASIC1.44□□□□□ -2.18
CCDC47Q96A33 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.44□□□□□ -2.18
CCDC47Q96A33 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.44□□□□□ -2.18
CCDC47Q96A33 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC47Q96A33 CYP3A52P-201ENST00000563326 91 ntBASIC1.44□□□□□ -2.18
CCDC47Q96A33 AC146944.4-201ENST00000602697 718 ntBASIC1.44□□□□□ -2.18
CCDC47Q96A33 AL365434.2-201ENST00000607979 234 ntBASIC1.44□□□□□ -2.18
CCDC47Q96A33 AC068792.1-201ENST00000621354 417 ntBASIC1.44□□□□□ -2.18
CCDC47Q96A33 SCARNA4-201ENST00000629045 128 ntBASIC1.44□□□□□ -2.18
CCDC47Q96A33 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.44□□□□□ -2.18
CCDC47Q96A33 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC47Q96A33 Y_RNA.287-201ENST00000364853 94 ntBASIC1.43□□□□□ -2.18
CCDC47Q96A33 MIR513A1-201ENST00000385138 129 ntBASIC1.43□□□□□ -2.18
CCDC47Q96A33 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CCDC47Q96A33 MIR764-201ENST00000390811 85 ntBASIC1.43□□□□□ -2.18
CCDC47Q96A33 EIF4E2P1-201ENST00000393781 255 ntBASIC1.43□□□□□ -2.18
CCDC47Q96A33 MIR450B-201ENST00000401182 78 ntBASIC1.43□□□□□ -2.18
CCDC47Q96A33 MIR320B2-201ENST00000408479 138 ntBASIC1.43□□□□□ -2.18
CCDC47Q96A33 SNX2P2-201ENST00000424553 323 ntBASIC1.43□□□□□ -2.18
CCDC47Q96A33 snoU13.23-201ENST00000458863 104 ntBASIC1.43□□□□□ -2.18
CCDC47Q96A33 HMGN1P12-201ENST00000499125 195 ntBASIC1.43□□□□□ -2.18
CCDC47Q96A33 AC010486.3-201ENST00000511602 785 ntBASIC1.43□□□□□ -2.18
CCDC47Q96A33 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC47Q96A33 CPDP1-201ENST00000579660 283 ntBASIC1.43□□□□□ -2.18
CCDC47Q96A33 MIR7843-201ENST00000622274 79 ntBASIC1.43□□□□□ -2.18
CCDC47Q96A33 ZNF204P-201ENST00000416749 2397 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 RNU6-457P-201ENST00000363999 107 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 RNU6-784P-201ENST00000384330 106 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 MIR487A-201ENST00000385009 80 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 RNA5SP323-201ENST00000391094 133 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 RNA5SP467-201ENST00000391274 118 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 DEFB108C-201ENST00000400154 252 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 AC015922.2-201ENST00000435593 184 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 RNU1-117P-201ENST00000517041 158 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 AP003033.1-201ENST00000527244 415 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 AL442163.3-201ENST00000554110 156 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 AC015712.3-201ENST00000559380 164 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC47Q96A33 AC097065.2-201ENST00000608159 533 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 AC040896.1-201ENST00000613819 479 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 AC137590.2-201ENST00000619709 240 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC47Q96A33 AL078596.1-201ENST00000624856 447 ntBASIC1.42□□□□□ -2.18
CCDC47Q96A33 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC47Q96A33 Y_RNA.167-201ENST00000363735 109 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 RNA5SP259-201ENST00000365541 109 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 U8.10-201ENST00000384260 133 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 Y_RNA.481-201ENST00000384373 102 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC47Q96A33 SNRPEP10-201ENST00000420249 274 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC47Q96A33 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC47Q96A33 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC47Q96A33 RN7SKP210-201ENST00000459176 261 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC47Q96A33 RPL23AP75-201ENST00000491601 451 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 AL163195.1-201ENST00000496941 348 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 AC108210.2-201ENST00000503681 201 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 RNU6-835P-201ENST00000516974 104 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC47Q96A33 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC47Q96A33 DNAJC19P9-201ENST00000555084 351 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.41□□□□□ -2.18
CCDC47Q96A33 AC068338.1-201ENST00000565567 176 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC47Q96A33 MIR4742-201ENST00000581069 85 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 AC100830.2-201ENST00000581636 240 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 RN7SKP299-201ENST00000606679 301 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 FAM157A-202ENST00000615155 405 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 AC073534.2-201ENST00000620377 381 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC47Q96A33 MIR6863-201ENST00000636112 90 ntBASIC1.41□□□□□ -2.18
CCDC47Q96A33 AC091812.1-201ENST00000432235 1948 ntBASIC1.4□□□□□ -2.18
CCDC47Q96A33 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
CCDC47Q96A33 SNORA70.7-201ENST00000384159 133 ntBASIC1.4□□□□□ -2.19
CCDC47Q96A33 MIR514A2-201ENST00000385131 88 ntBASIC1.4□□□□□ -2.19
CCDC47Q96A33 MIR514A3-201ENST00000385132 88 ntBASIC1.4□□□□□ -2.19
CCDC47Q96A33 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CCDC47Q96A33 RNA5SP109-201ENST00000391010 116 ntBASIC1.4□□□□□ -2.19
CCDC47Q96A33 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC47Q96A33 AC009474.2-201ENST00000451383 136 ntBASIC1.4□□□□□ -2.19
CCDC47Q96A33 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.4□□□□□ -2.19
CCDC47Q96A33 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC47Q96A33 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.4□□□□□ -2.19
CCDC47Q96A33 RN7SKP179-201ENST00000516126 217 ntBASIC1.4□□□□□ -2.19
CCDC47Q96A33 AL512310.8-201ENST00000550183 120 ntBASIC1.4□□□□□ -2.19
CCDC47Q96A33 MIR4421-201ENST00000578133 69 ntBASIC1.4□□□□□ -2.19
CCDC47Q96A33 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC47Q96A33 AC009033.1-201ENST00000624279 431 ntBASIC1.4□□□□□ -2.19
CCDC47Q96A33 AC097520.1-201ENST00000624435 385 ntBASIC1.4□□□□□ -2.19
CCDC47Q96A33 snoZ196.1-201ENST00000625269 89 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms