Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC107083.1-201ENST00000439643 279 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 MRPS10P1-201ENST00000448483 130 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.650-201ENST00000459002 102 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 RNU6-107P-201ENST00000516643 102 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.777-201ENST00000516982 102 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 SCARNA11.3-201ENST00000517276 130 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 HSPE1P18-201ENST00000517602 280 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.771-201ENST00000598668 102 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 RPL30P11-203ENST00000598995 310 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Z83818.1-201ENST00000603584 150 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.789-201ENST00000622480 102 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 U6.98-201ENST00000637157 84 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 AC135776.4-201ENST00000624300 1904 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 AC091564.4-201ENST00000533934 2194 ntBASIC3.18□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.76-201ENST00000362931 109 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.101-201ENST00000363154 102 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.122-201ENST00000363331 96 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 SNORA18.2-201ENST00000383865 132 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 RNU6-1062P-201ENST00000383908 107 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.418-201ENST00000384029 102 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 AC024067.1-201ENST00000426199 223 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 RPL23AP3-201ENST00000453844 468 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.644-201ENST00000459006 113 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 RNU6-155P-201ENST00000516347 100 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.674-201ENST00000516362 113 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 RN7SKP40-201ENST00000517211 242 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 AC055872.1-201ENST00000570978 278 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 MIR3186-201ENST00000577404 85 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 MIR4282-201ENST00000583613 67 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 MIR7106-201ENST00000612419 65 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 FTX_2.1-201ENST00000618816 94 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 MIR6852-201ENST00000621699 66 ntBASIC3.17□□□□□ -1.9
SH3RF2Q8TEC5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 MIR411-201ENST00000362239 96 ntBASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.270-201ENST00000364693 104 ntBASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 Y_RNA.292-201ENST00000364904 97 ntBASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 RNU1-101P-201ENST00000391171 127 ntBASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 AC009963.1-201ENST00000417265 157 ntBASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 AL049830.2-201ENST00000480072 201 ntBASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 AC107294.3-201ENST00000609211 526 ntBASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 AC073476.4-201ENST00000628409 72 ntBASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 MIR7153-201ENST00000637758 57 ntBASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 MAPK10-322ENST00000641485 4530 ntBASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
SH3RF2Q8TEC5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SH3RF2Q8TEC5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SH3RF2Q8TEC5 RNY4P28-201ENST00000365281 93 ntBASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 RNU6-1027P-201ENST00000383998 107 ntBASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 Y_RNA.510-201ENST00000384511 114 ntBASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 Y_RNA.626-201ENST00000411288 95 ntBASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 EEF1A1P41-201ENST00000414667 207 ntBASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 TOMM22P2-201ENST00000430735 237 ntBASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 Y_RNA.638-201ENST00000459374 113 ntBASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 RPL31P41-201ENST00000477967 372 ntBASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 AC092628.2-201ENST00000622492 339 ntBASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SH3RF2Q8TEC5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.14□□□□□ -1.91
SH3RF2Q8TEC5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.14□□□□□ -1.91
SH3RF2Q8TEC5 RNU6-1289P-201ENST00000384431 106 ntBASIC3.14□□□□□ -1.91
SH3RF2Q8TEC5 RNA5SP293-201ENST00000410527 113 ntBASIC3.14□□□□□ -1.91
SH3RF2Q8TEC5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.14□□□□□ -1.91
SH3RF2Q8TEC5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3RF2Q8TEC5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.14□□□□□ -1.91
SH3RF2Q8TEC5 RPS29P26-201ENST00000477483 171 ntBASIC3.14□□□□□ -1.91
SH3RF2Q8TEC5 MRPS36P2-201ENST00000512569 299 ntBASIC3.14□□□□□ -1.91
SH3RF2Q8TEC5 CBX3P4-201ENST00000538909 354 ntBASIC3.14□□□□□ -1.91
SH3RF2Q8TEC5 RPL21P9-201ENST00000556149 474 ntBASIC3.14□□□□□ -1.91
SH3RF2Q8TEC5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3RF2Q8TEC5 AC073349.3-201ENST00000617616 186 ntBASIC3.14□□□□□ -1.91
SH3RF2Q8TEC5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 MIR148B-201ENST00000362252 99 ntBASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 U3.8-201ENST00000363675 217 ntBASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 Y_RNA.180-201ENST00000363867 113 ntBASIC3.13□□□□□ -1.91
SH3RF2Q8TEC5 SNORD32B-201ENST00000364460 84 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms