Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC146944.4-201ENST00000602697 718 ntBASIC0.09□□□□□ -2.39
RTL9Q8NET4 AL139022.2-201ENST00000606934 443 ntBASIC0.09□□□□□ -2.39
RTL9Q8NET4 MTND5P16-201ENST00000460269 1703 ntBASIC0.09□□□□□ -2.4
RTL9Q8NET4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.09□□□□□ -2.4
RTL9Q8NET4 RNU6-428P-201ENST00000362942 107 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
RTL9Q8NET4 RNU6-975P-201ENST00000384296 105 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 Y_RNA.504-201ENST00000384481 104 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 RNU6-1067P-201ENST00000384752 107 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
RTL9Q8NET4 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.08□□□□□ -2.4
RTL9Q8NET4 AC244098.3-201ENST00000424803 96 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.08□□□□□ -2.4
RTL9Q8NET4 AC245047.8-201ENST00000456455 284 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 AC079382.1-201ENST00000493346 557 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 SNORA70.12-201ENST00000516084 153 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 MTATP6P15-201ENST00000527233 835 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.08□□□□□ -2.4
RTL9Q8NET4 AL391840.1-201ENST00000571144 367 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 MIR4667-201ENST00000578933 66 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 AL162424.1-201ENST00000602325 221 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.08□□□□□ -2.4
RTL9Q8NET4 Z99497.2-201ENST00000603634 310 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 AC008250.2-201ENST00000615261 205 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 AP000484.1-201ENST00000620067 1252 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.08□□□□□ -2.4
RTL9Q8NET4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.08□□□□□ -2.4
RTL9Q8NET4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.08□□□□□ -2.4
RTL9Q8NET4 Y_RNA.324-201ENST00000365165 102 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 Y_RNA.330-201ENST00000365230 109 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 MIR549A-201ENST00000385268 96 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 RNU6-1093P-201ENST00000391194 107 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 MRPL42P3-201ENST00000401492 326 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.07□□□□□ -2.4
RTL9Q8NET4 AC245047.3-201ENST00000429428 127 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 RPL23AP50-201ENST00000434149 455 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.07□□□□□ -2.4
RTL9Q8NET4 AC067940.1-201ENST00000458411 300 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 TRBVB-201ENST00000477100 408 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 AC108740.1-201ENST00000498629 225 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.07□□□□□ -2.4
RTL9Q8NET4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.07□□□□□ -2.4
RTL9Q8NET4 AC092354.1-201ENST00000606057 376 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 AL136221.1-201ENST00000621449 509 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.07□□□□□ -2.4
RTL9Q8NET4 AL359697.1-201ENST00000624879 587 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 AL450472.1-202ENST00000637286 180 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 AC100810.6-201ENST00000638068 285 ntBASIC0.07□□□□□ -2.4
RTL9Q8NET4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
RTL9Q8NET4 SNORA2.2-201ENST00000365473 135 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 RNU2-39P-201ENST00000410604 198 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 RPL22P17-201ENST00000438729 315 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 LINC01399-202ENST00000458450 244 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.06□□□□□ -2.4
RTL9Q8NET4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.06□□□□□ -2.4
RTL9Q8NET4 RNU6-917P-201ENST00000516294 104 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 AC106038.2-201ENST00000520706 568 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 RNU6-1192P-201ENST00000612197 107 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 AL359075.3-201ENST00000613288 217 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 RNU6-489P-201ENST00000618289 107 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 AL121895.2-201ENST00000619558 447 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 AP000943.4-201ENST00000622912 357 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.06□□□□□ -2.4
RTL9Q8NET4 RNU6-793P-201ENST00000384233 104 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 RNU6-700P-201ENST00000391043 107 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 RNA5SP504-201ENST00000410676 117 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.06□□□□□ -2.4
RTL9Q8NET4 AC012306.1-201ENST00000423267 114 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 AC137499.1-201ENST00000427602 88 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 AL162725.1-201ENST00000435405 301 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 AC008628.2-201ENST00000502605 298 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 AC010486.2-201ENST00000505572 483 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 AC117522.1-201ENST00000509821 380 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 RNA5SP337-201ENST00000517007 109 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 AC022616.6-201ENST00000520479 119 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 AC023827.1-201ENST00000569247 97 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
RTL9Q8NET4 SNORA36A-201ENST00000384221 132 ntBASIC0.05□□□□□ -2.4
RTL9Q8NET4 SNORA12.1-201ENST00000390873 148 ntBASIC0.05□□□□□ -2.4
RTL9Q8NET4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.05□□□□□ -2.4
RTL9Q8NET4 MIR1912-201ENST00000410389 80 ntBASIC0.05□□□□□ -2.4
RTL9Q8NET4 CDK8P2-201ENST00000415020 547 ntBASIC0.05□□□□□ -2.4
RTL9Q8NET4 BTBD7P2-201ENST00000441962 620 ntBASIC0.05□□□□□ -2.4
RTL9Q8NET4 OR9P1P-201ENST00000496431 281 ntBASIC0.05□□□□□ -2.4
RTL9Q8NET4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
RTL9Q8NET4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.05□□□□□ -2.4
RTL9Q8NET4 AC023050.3-201ENST00000541142 333 ntBASIC0.05□□□□□ -2.4
RTL9Q8NET4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.05□□□□□ -2.4
RTL9Q8NET4 AC131055.1-201ENST00000584626 316 ntBASIC0.05□□□□□ -2.4
RTL9Q8NET4 AC112187.2-201ENST00000604345 283 ntBASIC0.05□□□□□ -2.4
RTL9Q8NET4 AL136317.1-201ENST00000612653 226 ntBASIC0.05□□□□□ -2.4
RTL9Q8NET4 U6.108-201ENST00000637764 58 ntBASIC0.05□□□□□ -2.4
RTL9Q8NET4 AP000568.1-201ENST00000282964 442 ntBASIC0.04□□□□□ -2.4
RTL9Q8NET4 SNAP23P1-201ENST00000433229 246 ntBASIC0.04□□□□□ -2.4
RTL9Q8NET4 AC005002.2-201ENST00000438228 269 ntBASIC0.04□□□□□ -2.4
RTL9Q8NET4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms