Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 AC106883.1-201ENST00000418805 562 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 AL593851.1-201ENST00000426171 157 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 UBE2D3P4-201ENST00000441973 436 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 NFU1P2-201ENST00000448700 469 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 RPS29P15-201ENST00000458329 171 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 AC105758.1-201ENST00000506038 399 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 RNA5SP255-201ENST00000516370 107 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 RNU6-1069P-201ENST00000516612 133 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 RNU6-323P-201ENST00000521915 107 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 MTND1P8-201ENST00000571424 950 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 MIR5000-201ENST00000577717 103 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 MIR3682-201ENST00000581338 84 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 AL512605.2-201ENST00000592972 256 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 AC068790.6-201ENST00000602558 258 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 Z99497.2-201ENST00000603634 310 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 AC080078.2-201ENST00000603766 501 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 AL022161.1-201ENST00000604390 213 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 AL391834.2-201ENST00000609982 546 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 AL513423.1-201ENST00000621695 132 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 U6.108-201ENST00000637764 58 ntBASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
ZNF439Q8NDP4 RNU6-266P-201ENST00000364225 107 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 RNY4P34-201ENST00000364779 95 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 RNU4-12P-201ENST00000365233 139 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 RNU6-108P-201ENST00000365558 107 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 SNORA80D-201ENST00000384488 135 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 RNU6-1127P-201ENST00000384580 107 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 SNORD41-201ENST00000386967 70 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 RPS26P42-201ENST00000413485 326 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 AC004386.2-201ENST00000441858 148 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 AC009237.7-201ENST00000447357 229 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 SNRPGP9-201ENST00000456025 225 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 RNA5SP121-201ENST00000516537 101 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 RNU1-142P-201ENST00000516682 145 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 AL137100.2-201ENST00000555786 315 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 MIR5006-201ENST00000583027 110 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 AC146944.4-201ENST00000602697 718 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 AC006001.4-201ENST00000622243 395 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 AL603839.4-201ENST00000624658 1005 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 SNORD3E-202ENST00000627253 216 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 AC027514.1-201ENST00000588561 1603 ntBASIC0.42□□□□□ -2.34
ZNF439Q8NDP4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 RNA5SP347-201ENST00000362445 119 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 RNU6-1214P-201ENST00000363650 109 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 Y_RNA.226-201ENST00000364337 114 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 RNU6-110P-201ENST00000384508 104 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 MIR586-201ENST00000385035 97 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 MIR942-201ENST00000401111 86 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 RPS3AP3-201ENST00000411933 242 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 AC016909.1-201ENST00000415916 166 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 AL354692.1-201ENST00000423044 315 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 AC009961.2-201ENST00000435771 251 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 MTCO3P18-201ENST00000440206 761 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 MTCO2P3-201ENST00000442543 421 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 AL162424.1-201ENST00000602325 221 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 AC022217.4-201ENST00000604389 163 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 AL359075.3-201ENST00000613288 217 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 MIR8054-201ENST00000620877 86 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 AC106754.2-201ENST00000623006 233 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 AC106754.1-201ENST00000562632 1513 ntBASIC0.41□□□□□ -2.34
ZNF439Q8NDP4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 RNU4-76P-201ENST00000364509 141 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 Y_RNA.399-201ENST00000383955 105 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 MIR653-201ENST00000385279 96 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 RNU6-1106P-201ENST00000390845 107 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 AL034345.1-201ENST00000407768 123 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 MIR1287-201ENST00000408492 90 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 AC008134.1-201ENST00000420943 193 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 AC092628.1-201ENST00000436250 252 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 AC005002.2-201ENST00000438228 269 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 SCARNA18-201ENST00000459004 134 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 RNU6-311P-201ENST00000516224 102 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 AP003461.1-201ENST00000528866 78 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 AC007834.2-201ENST00000536310 343 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 APOOP3-201ENST00000536787 586 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 MIR4703-201ENST00000577728 79 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 AL078603.1-201ENST00000603824 313 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 Z84480.1-201ENST00000605131 311 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 AL353765.1-201ENST00000605514 183 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 215.4 ms