Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 MTCO3P10-201ENST00000455912 772 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 AC097473.1-201ENST00000508142 408 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.48□□□□□ -2.01
USP38Q8NB14 AC093303.1-201ENST00000514549 295 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 RNU6-120P-201ENST00000516077 103 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 Y_RNA.706-201ENST00000516933 99 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 RNU6-264P-201ENST00000517134 104 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 AC018630.3-201ENST00000542637 96 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 RAB11AP2-201ENST00000545905 639 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 ANP32BP3-201ENST00000559213 706 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 SNORD14A-201ENST00000606526 91 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.48□□□□□ -2.01
USP38Q8NB14 AC133104.2-201ENST00000615272 193 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 MIR6766-201ENST00000622641 72 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 MIR219B-201ENST00000637023 88 ntBASIC2.48□□□□□ -2.01
USP38Q8NB14 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
USP38Q8NB14 RNU6-234P-201ENST00000365229 104 ntBASIC2.47□□□□□ -2.01
USP38Q8NB14 SNORA12.2-201ENST00000391040 156 ntBASIC2.47□□□□□ -2.01
USP38Q8NB14 AC092423.1-201ENST00000430165 186 ntBASIC2.47□□□□□ -2.01
USP38Q8NB14 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.47□□□□□ -2.01
USP38Q8NB14 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.47□□□□□ -2.01
USP38Q8NB14 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.47□□□□□ -2.01
USP38Q8NB14 RNU7-87P-201ENST00000459343 62 ntBASIC2.47□□□□□ -2.01
USP38Q8NB14 AC005840.1-201ENST00000498412 377 ntBASIC2.47□□□□□ -2.01
USP38Q8NB14 RNA5SP200-201ENST00000516360 103 ntBASIC2.47□□□□□ -2.01
USP38Q8NB14 AC034114.1-201ENST00000520293 285 ntBASIC2.47□□□□□ -2.01
USP38Q8NB14 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.47□□□□□ -2.01
USP38Q8NB14 AL355802.3-201ENST00000607571 545 ntBASIC2.47□□□□□ -2.01
USP38Q8NB14 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.47□□□□□ -2.01
USP38Q8NB14 RMST_6.1-201ENST00000611980 203 ntBASIC2.47□□□□□ -2.01
USP38Q8NB14 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USP38Q8NB14 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
USP38Q8NB14 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USP38Q8NB14 Y_RNA.319-201ENST00000365138 92 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 RNU6-890P-201ENST00000384121 107 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 RNU6-1026P-201ENST00000384465 108 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 RNY4P36-201ENST00000391116 96 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 MIR320B2-201ENST00000408479 138 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 AC022028.1-201ENST00000412054 408 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.46□□□□□ -2.02
USP38Q8NB14 AC236972.2-201ENST00000434979 310 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.46□□□□□ -2.02
USP38Q8NB14 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
USP38Q8NB14 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 AL035666.1-201ENST00000446195 348 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 RNU7-14P-201ENST00000459331 62 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 AC022493.2-201ENST00000506122 481 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 RNU6-1098P-201ENST00000516772 96 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 RNU2-44P-201ENST00000516795 194 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 Y_RNA.718-201ENST00000517110 102 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 RNA5SP490-201ENST00000517141 136 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 MIR5006-201ENST00000583027 110 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 LARP7P1-201ENST00000605576 316 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 AC005562.2-201ENST00000618264 111 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 AC098657.3-201ENST00000620434 263 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 MIR6132-201ENST00000622083 109 ntBASIC2.46□□□□□ -2.02
USP38Q8NB14 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USP38Q8NB14 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.45□□□□□ -2.02
USP38Q8NB14 SNORD115-32-201ENST00000364079 82 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 RNU6-438P-201ENST00000365561 103 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 U8.10-201ENST00000384260 133 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 SNORD116-29-201ENST00000384516 83 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 MIR221-201ENST00000385135 110 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 RNU2-48P-201ENST00000410694 191 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 RPS26P42-201ENST00000413485 326 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.45□□□□□ -2.02
USP38Q8NB14 AC004386.2-201ENST00000441858 148 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.45□□□□□ -2.02
USP38Q8NB14 PRELID3BP1-201ENST00000457142 540 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.45□□□□□ -2.02
USP38Q8NB14 RPS23P5-201ENST00000495419 428 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.45□□□□□ -2.02
USP38Q8NB14 AC026271.5-201ENST00000577873 130 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.45□□□□□ -2.02
USP38Q8NB14 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
USP38Q8NB14 AC100812.1-201ENST00000607622 580 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 AL132822.1-201ENST00000617063 513 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 AC126177.8-201ENST00000618339 1015 ntBASIC2.45□□□□□ -2.02
USP38Q8NB14 AC245060.5-201ENST00000610778 3293 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USP38Q8NB14 MIR378A-201ENST00000362177 66 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 RNU6-99P-201ENST00000364721 107 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 RNU6-611P-201ENST00000384276 104 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 Y_RNA.540-201ENST00000384638 111 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 SNORA75.6-201ENST00000391318 127 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 AL355497.1-201ENST00000406262 551 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 AL357139.1-201ENST00000407792 426 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 RNA5SP270-201ENST00000411361 118 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 EDDM3CP-201ENST00000415977 425 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 HMGN2P18-201ENST00000450680 270 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 MTCO3P8-201ENST00000453691 755 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 AC104435.1-201ENST00000483483 166 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 RPL17P19-201ENST00000489069 552 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.44□□□□□ -2.02
USP38Q8NB14 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.44□□□□□ -2.02
USP38Q8NB14 AL031274.2-201ENST00000599419 203 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 SNRPGP20-201ENST00000604477 205 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 MIR1244-1-201ENST00000612829 85 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 AC009831.4-201ENST00000620744 325 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 AC012640.5-201ENST00000623897 319 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms