Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 RNU6-991P-201ENST00000516168 107 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 Y_RNA.708-201ENST00000516950 96 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 SNORA48.11-201ENST00000517015 89 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 RNU2-19P-201ENST00000517288 84 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 DEFB131C-201ENST00000528817 165 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 CYP4A27P-201ENST00000567218 190 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 AC090517.1-201ENST00000569307 266 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 FGF7P1-201ENST00000582820 288 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 AC016727.2-201ENST00000603988 621 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 AL356157.2-201ENST00000605122 111 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 PISRT1.1-201ENST00000616930 107 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 AP000560.1-201ENST00000624150 1937 ntBASIC1.55□□□□□ -2.16
LINC01555Q8NAE3 AC245060.5-201ENST00000610778 3293 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 RNU5E-4P-201ENST00000364931 120 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 RNU6-867P-201ENST00000364956 107 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 SNORA18.2-201ENST00000383865 132 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 Y_RNA.482-201ENST00000384377 111 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 MIR29B2-201ENST00000385055 81 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 RNU2-48P-201ENST00000410694 191 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 Y_RNA.646-201ENST00000410980 101 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 BX510359.4-201ENST00000423750 193 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 RPL23AP50-201ENST00000434149 455 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 MTCO3P10-201ENST00000455912 772 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 RPL30P15-201ENST00000457129 321 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 AC233702.2-202ENST00000562547 291 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 MIR4529-201ENST00000578110 78 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 AC005014.2-201ENST00000607795 599 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 AC025253.1-201ENST00000613623 543 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 AL162373.1-201ENST00000620433 407 ntBASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
LINC01555Q8NAE3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 RNU6-222P-201ENST00000362438 107 ntBASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 U3.9-201ENST00000363823 204 ntBASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 SNORD32B-201ENST00000364460 84 ntBASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 RNU6-310P-201ENST00000384655 107 ntBASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 MTCYBP2-201ENST00000407745 171 ntBASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 AC243428.1-201ENST00000421099 264 ntBASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 ATP5EP1-201ENST00000510257 156 ntBASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 AC113139.1-201ENST00000605049 239 ntBASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 AL353997.5-201ENST00000618886 171 ntBASIC1.53□□□□□ -2.16
LINC01555Q8NAE3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 RNU4-73P-201ENST00000363164 141 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 RNU6-1188P-201ENST00000363795 107 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 RNU6-457P-201ENST00000363999 107 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 Y_RNA.263-201ENST00000364659 114 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 Y_RNA.405-201ENST00000383979 100 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 Y_RNA.451-201ENST00000384200 100 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 SNORD116-29-201ENST00000384516 83 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 Y_RNA.524-201ENST00000384564 100 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 Y_RNA.561-201ENST00000384694 100 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 MIR561-201ENST00000385216 97 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 AL356379.1-201ENST00000414105 126 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 EIF4EP2-201ENST00000422816 654 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 Y_RNA.632-201ENST00000459189 102 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 RNU6-1098P-201ENST00000516772 96 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 RAB11AP2-201ENST00000545905 639 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 UBL5P4-201ENST00000562584 236 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 MIR4287-201ENST00000579398 78 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 MIR3124-201ENST00000582636 67 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 MIR4795-201ENST00000584182 89 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 AC084781.2-201ENST00000615568 161 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC01555Q8NAE3 AL359851.1-201ENST00000569460 4997 ntBASIC1.51□□□□□ -2.17
LINC01555Q8NAE3 ZNF204P-201ENST00000416749 2397 ntBASIC1.51□□□□□ -2.17
LINC01555Q8NAE3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.51□□□□□ -2.17
LINC01555Q8NAE3 RNU6-874P-201ENST00000362390 105 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms