| CHCHD4 | Q8N4Q1 | RNU7-14P-201 | ENST00000459331 | 62 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | Y_RNA.655-201 | ENST00000515919 | 96 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC087518.1-201 | ENST00000524098 | 187 nt | TSL 3 BASIC | 1.75 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC016256.1-201 | ENST00000547971 | 354 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | CTHRC1P1-201 | ENST00000605383 | 469 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | MIR6504-201 | ENST00000613520 | 61 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | FAM157A-202 | ENST00000615155 | 405 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | U4.5-201 | ENST00000617137 | 123 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AL450472.1-202 | ENST00000637286 | 180 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AL807742.1-203 | ENST00000637444 | 759 nt | TSL 5 BASIC | 1.75 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC008781.2-201 | ENST00000502205 | 2480 nt | TSL 1 (best) BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | Y_RNA.100-201 | ENST00000363141 | 102 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RNY4P14-201 | ENST00000363656 | 96 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | SNORD31B-201 | ENST00000364977 | 69 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | Y_RNA.450-201 | ENST00000384198 | 113 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | Y_RNA.453-201 | ENST00000384223 | 109 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RNY1P14-201 | ENST00000384426 | 108 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | Y_RNA.516-201 | ENST00000384541 | 124 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | DEFB110-202 | ENST00000393660 | 189 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RNU2-41P-201 | ENST00000410991 | 178 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC004965.1-201 | ENST00000413033 | 213 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | MTCO1P21-201 | ENST00000416634 | 589 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | SNRPEP10-201 | ENST00000420249 | 274 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | LINC02541-201 | ENST00000427157 | 327 nt | TSL 3 BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | SIRPG-AS1-201 | ENST00000437384 | 410 nt | TSL 3 BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | MTND1P34-201 | ENST00000438556 | 671 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | HSPE1P24-201 | ENST00000450782 | 238 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RPS29P27-201 | ENST00000463711 | 170 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC110799.1-201 | ENST00000509098 | 449 nt | TSL 3 BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC008852.1-201 | ENST00000510198 | 451 nt | TSL 2 BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC011092.2-201 | ENST00000533659 | 586 nt | TSL 1 (best) BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC009269.4-201 | ENST00000557828 | 440 nt | TSL 3 BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | TPRKBP2-201 | ENST00000565969 | 475 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | MIR4419B-201 | ENST00000577260 | 68 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | MIR4255-201 | ENST00000579351 | 72 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC010928.2-201 | ENST00000588017 | 287 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC069114.2-201 | ENST00000604699 | 304 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | MIR502-201 | ENST00000606349 | 86 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | HTN1-205 | ENST00000610341 | 536 nt | APPRIS P1 TSL 1 (best) BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | MIR8076-201 | ENST00000611401 | 83 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | PLD1-217 | ENST00000627725 | 174 nt | TSL 5 BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC024614.3-201 | ENST00000637860 | 256 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | CHST9-202 | ENST00000581714 | 2043 nt | APPRIS P1 TSL 1 (best) BASIC | 1.74 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | Y_RNA.295-201 | ENST00000364918 | 102 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | SNORD48-201 | ENST00000364953 | 64 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | MIR520A-201 | ENST00000384862 | 85 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | NPS-201 | ENST00000398023 | 270 nt | APPRIS P1 TSL 5 BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AL353572.1-201 | ENST00000442490 | 417 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | PCMTD1P1-201 | ENST00000455560 | 355 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | PPP1R2P5-201 | ENST00000457256 | 603 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RPS23P5-201 | ENST00000495419 | 428 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | Y_RNA.670-201 | ENST00000516255 | 105 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AP001485.1-201 | ENST00000604799 | 199 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | MIR3976-201 | ENST00000606807 | 139 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC104458.1-201 | ENST00000608243 | 463 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | MESTIT1_1.1-201 | ENST00000618871 | 140 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | HOXA11-AS1_4.1-201 | ENST00000620901 | 233 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC100810.6-201 | ENST00000638068 | 285 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AL161722.3-201 | ENST00000605789 | 2983 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RNU6-1286P-201 | ENST00000383871 | 107 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | SNORA29-201 | ENST00000384183 | 140 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RNU6-360P-201 | ENST00000390944 | 104 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | JTBP1-201 | ENST00000441314 | 247 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | MYCBP2-AS1-203 | ENST00000450627 | 349 nt | TSL 3 BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC016925.1-201 | ENST00000458303 | 298 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RNU7-187P-201 | ENST00000458985 | 68 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | TOMM22P6-201 | ENST00000465035 | 409 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RPL26P26-201 | ENST00000480251 | 434 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RNU6-256P-201 | ENST00000516747 | 97 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RNU6-1098P-201 | ENST00000516772 | 96 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RNU6-273P-201 | ENST00000516937 | 96 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | LINC02095-202 | ENST00000543512 | 323 nt | TSL 3 BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC008083.3-202 | ENST00000552063 | 277 nt | TSL 3 BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC025580.2-205 | ENST00000559960 | 552 nt | TSL 4 BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | SNORA77B-201 | ENST00000578179 | 125 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC009994.1-201 | ENST00000606889 | 253 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RMST_3.1-201 | ENST00000611651 | 109 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | uc_338.5-201 | ENST00000611839 | 155 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC093913.1-201 | ENST00000614178 | 329 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | AC068205.3-201 | ENST00000636385 | 468 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CHCHD4 | Q8N4Q1 | RNU6-562P-201 | ENST00000362731 | 107 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | Y_RNA.89-201 | ENST00000363031 | 102 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | Y_RNA.414-201 | ENST00000384011 | 101 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | RNU6-42P-201 | ENST00000384165 | 107 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | SNORD115-47-201 | ENST00000391226 | 86 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | ZNF885P-201 | ENST00000420174 | 1098 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | AL358453.1-201 | ENST00000422522 | 250 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | C8orf59P1-201 | ENST00000429930 | 303 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | USP9YP28-201 | ENST00000435142 | 589 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | MTCO3P18-201 | ENST00000440206 | 761 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | TRAPPC2P8-201 | ENST00000440676 | 396 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | AC007395.1-201 | ENST00000451333 | 677 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | ATP5J2P3-201 | ENST00000451550 | 258 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | AC025918.1-201 | ENST00000452467 | 383 nt | TSL 3 BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | RPS29P23-201 | ENST00000458635 | 123 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | NMTRQ-TTG12-1-201 | ENST00000467595 | 72 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | LEKR1-205 | ENST00000477399 | 621 nt | TSL 2 BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | AC091435.1-201 | ENST00000505442 | 584 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | AC145146.2-202 | ENST00000508118 | 326 nt | TSL 3 BASIC | 1.71 | □□□□□ -2.14 | | |
| CHCHD4 | Q8N4Q1 | RNU6-902P-201 | ENST00000517212 | 91 nt | BASIC | 1.71 | □□□□□ -2.14 | | |