Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNU1-139P-201ENST00000391307 165 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 MTCO2P33-201ENST00000402100 465 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 AL590004.2-201ENST00000404787 371 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 RN7SKP223-201ENST00000410582 62 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 RNU6-1001P-201ENST00000411265 100 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 AC104332.1-201ENST00000440471 797 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 RPL23AP3-201ENST00000453844 468 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 RNU6-581P-201ENST00000516214 105 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 Y_RNA.683-201ENST00000516508 93 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 AC024405.2-202ENST00000532731 184 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 AC021739.1-201ENST00000559631 174 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.16□□□□□ -1.9
SYNE4Q8N205 MIR3133-201ENST00000583157 78 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 AC011921.3-201ENST00000605540 361 ntBASIC3.16□□□□□ -1.9
SYNE4Q8N205 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.15□□□□□ -1.9
SYNE4Q8N205 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SYNE4Q8N205 RNU6-961P-201ENST00000363893 105 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 Y_RNA.199-201ENST00000364014 102 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 SNORD115-32-201ENST00000364079 82 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 RNU6-740P-201ENST00000364734 105 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 MIR10B-201ENST00000385011 110 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 FTH1P15-201ENST00000406984 280 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 SNORD12B-201ENST00000410433 91 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 Y_RNA.793-201ENST00000411222 111 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.15□□□□□ -1.91
SYNE4Q8N205 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNE4Q8N205 RPL23AP95-201ENST00000426806 265 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 WARS2P1-201ENST00000429678 537 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 HMGN2P3-201ENST00000433603 273 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 HMGN2P5-201ENST00000436882 273 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 AC007969.2-201ENST00000441891 191 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 snoU13.6-201ENST00000458785 104 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 SNRPGP7-201ENST00000469016 106 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 RPS27AP9-201ENST00000477681 438 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 AC006483.1-201ENST00000487308 313 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 SNORA31.1-201ENST00000515993 133 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 SNORA31.5-201ENST00000516190 133 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 RNU6-966P-201ENST00000516479 104 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 AC006199.1-201ENST00000548728 219 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 NACAP3-201ENST00000552100 481 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNE4Q8N205 MIR4474-201ENST00000579189 78 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 RMST_6.1-201ENST00000611980 203 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.15□□□□□ -1.91
SYNE4Q8N205 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SYNE4Q8N205 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.14□□□□□ -1.91
SYNE4Q8N205 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
SYNE4Q8N205 AC110774.1-201ENST00000623567 2018 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SYNE4Q8N205 RNU6-545P-201ENST00000362681 104 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 Y_RNA.446-201ENST00000384178 104 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 SNORD63-201ENST00000384262 68 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 Y_RNA.504-201ENST00000384481 104 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 Y_RNA.626-201ENST00000411288 95 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 COX6CP10-201ENST00000416832 224 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.14□□□□□ -1.91
SYNE4Q8N205 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.14□□□□□ -1.91
SYNE4Q8N205 AC096638.1-201ENST00000444678 216 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 AL138752.1-201ENST00000452964 351 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 AP000705.1-201ENST00000454567 350 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 AL031183.1-201ENST00000457667 207 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 RN7SL636P-201ENST00000497504 294 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 RNU6-1114P-201ENST00000516022 107 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 AC087441.2-201ENST00000529141 262 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 AC055872.1-201ENST00000570978 278 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 MIR5695-201ENST00000579717 85 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 MIR4423-201ENST00000580922 80 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 AC046143.2-201ENST00000609789 160 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 AL357075.2-201ENST00000614906 189 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 AC069528.2-201ENST00000624849 1991 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 ADAM3A-203ENST00000461344 2157 ntBASIC3.14□□□□□ -1.91
SYNE4Q8N205 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SYNE4Q8N205 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.14□□□□□ -1.91
SYNE4Q8N205 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SYNE4Q8N205 Y_RNA.44-201ENST00000362676 108 ntBASIC3.13□□□□□ -1.91
SYNE4Q8N205 RNU4-90P-201ENST00000362773 141 ntBASIC3.13□□□□□ -1.91
SYNE4Q8N205 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.13□□□□□ -1.91
SYNE4Q8N205 Y_RNA.418-201ENST00000384029 102 ntBASIC3.13□□□□□ -1.91
SYNE4Q8N205 RNU6-125P-201ENST00000384505 107 ntBASIC3.13□□□□□ -1.91
SYNE4Q8N205 MIR549A-201ENST00000385268 96 ntBASIC3.13□□□□□ -1.91
SYNE4Q8N205 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SYNE4Q8N205 RN7SKP51-201ENST00000410781 304 ntBASIC3.13□□□□□ -1.91
SYNE4Q8N205 AL135786.1-201ENST00000415892 214 ntBASIC3.13□□□□□ -1.91
SYNE4Q8N205 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.13□□□□□ -1.91
SYNE4Q8N205 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.13□□□□□ -1.91
SYNE4Q8N205 RPS15AP5-201ENST00000436276 388 ntBASIC3.13□□□□□ -1.91
SYNE4Q8N205 AC009237.7-201ENST00000447357 229 ntBASIC3.13□□□□□ -1.91
SYNE4Q8N205 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.13□□□□□ -1.91
SYNE4Q8N205 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.13□□□□□ -1.91
SYNE4Q8N205 RNU7-23P-201ENST00000459465 62 ntBASIC3.13□□□□□ -1.91
SYNE4Q8N205 RNU6-861P-201ENST00000516745 106 ntBASIC3.13□□□□□ -1.91
SYNE4Q8N205 RNU6-567P-201ENST00000516746 107 ntBASIC3.13□□□□□ -1.91
SYNE4Q8N205 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.13□□□□□ -1.91
SYNE4Q8N205 MIR3910-1-201ENST00000580936 111 ntBASIC3.13□□□□□ -1.91
SYNE4Q8N205 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SYNE4Q8N205 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.13□□□□□ -1.91
SYNE4Q8N205 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SYNE4Q8N205 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SYNE4Q8N205 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms