Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC018630.3-201ENST00000542637 96 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 AL365222.1-201ENST00000614661 98 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 AC092628.2-201ENST00000622492 339 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 MFSD8-233ENST00000641482 4860 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 AC092593.1-201ENST00000515413 1815 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 Y_RNA.101-201ENST00000363154 102 ntBASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 RNU6-449P-201ENST00000383914 107 ntBASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 Y_RNA.488-201ENST00000384403 102 ntBASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 Y_RNA.568-201ENST00000384742 113 ntBASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 MIR128-1-201ENST00000384921 82 ntBASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 RNU6-1328P-201ENST00000410938 106 ntBASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 AC004552.1-201ENST00000419089 348 ntBASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 RPS26P3-201ENST00000470205 348 ntBASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 AC090543.2-201ENST00000483963 348 ntBASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 AC004057.1-201ENST00000485827 348 ntBASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 AC025445.1-201ENST00000502728 300 ntBASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 MIR5692C2-201ENST00000577959 77 ntBASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 AC004467.1-201ENST00000615678 330 ntBASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.78□□□□□ -1.8
NPAS4Q8IUM7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
NPAS4Q8IUM7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 Y_RNA.400-201ENST00000383963 111 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 MIR586-201ENST00000385035 97 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 RNU2-2P-201ENST00000410396 191 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 RNA5SP272-201ENST00000516095 111 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 MIR4753-201ENST00000585119 83 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 RNU2-4P-201ENST00000606190 192 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 U2.15-201ENST00000611544 191 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 U2.16-201ENST00000613119 191 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 U2.12-201ENST00000613778 191 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 U2.9-201ENST00000615427 191 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 U2.11-201ENST00000616345 191 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 U2.2-201ENST00000616535 191 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 U2.3-201ENST00000617785 191 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 AL449363.1-201ENST00000617815 186 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 U2.19-201ENST00000618602 191 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 RNU2-1-201ENST00000618664 191 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 U2.6-201ENST00000619225 191 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 U2.5-201ENST00000619465 191 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 U2.10-201ENST00000620268 191 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 AC091932.3-201ENST00000624223 323 ntBASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.77□□□□□ -1.81
NPAS4Q8IUM7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 SNORD74.4-201ENST00000364129 80 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 RNU6-1305P-201ENST00000364353 104 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 RNU6-234P-201ENST00000365229 104 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 SNORA11.2-201ENST00000408318 127 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 AC004866.1-201ENST00000411748 78 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 AL161788.1-201ENST00000441805 169 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 RNU7-14P-201ENST00000459331 62 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 RNU6-155P-201ENST00000516347 100 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 RNU6-1098P-201ENST00000516772 96 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 AL008718.3-201ENST00000610217 321 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 AL356274.2-201ENST00000624379 3752 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 AC100821.1-201ENST00000523153 2479 ntBASIC3.76□□□□□ -1.81
NPAS4Q8IUM7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NPAS4Q8IUM7 RNU1-72P-201ENST00000362976 153 ntBASIC3.75□□□□□ -1.81
NPAS4Q8IUM7 Y_RNA.215-201ENST00000364204 112 ntBASIC3.75□□□□□ -1.81
NPAS4Q8IUM7 Y_RNA.238-201ENST00000364441 102 ntBASIC3.75□□□□□ -1.81
NPAS4Q8IUM7 SNORD87-201ENST00000364849 89 ntBASIC3.75□□□□□ -1.81
NPAS4Q8IUM7 RNU6-1168P-201ENST00000390831 104 ntBASIC3.75□□□□□ -1.81
NPAS4Q8IUM7 RNU6-1248P-201ENST00000391096 64 ntBASIC3.75□□□□□ -1.81
NPAS4Q8IUM7 Y_RNA.586-201ENST00000391146 98 ntBASIC3.75□□□□□ -1.81
NPAS4Q8IUM7 AL138878.1-201ENST00000405131 347 ntBASIC3.75□□□□□ -1.81
NPAS4Q8IUM7 RNU2-54P-201ENST00000410299 190 ntBASIC3.75□□□□□ -1.81
NPAS4Q8IUM7 BTF3P11-201ENST00000426582 477 ntBASIC3.75□□□□□ -1.81
NPAS4Q8IUM7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms