Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 MIR887-201ENST00000401258 79 ntBASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 AC009963.1-201ENST00000417265 157 ntBASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 AC012306.1-201ENST00000423267 114 ntBASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 AL139132.1-201ENST00000431587 344 ntBASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 AC244670.1-201ENST00000436879 112 ntBASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 RNA5SP272-201ENST00000516095 111 ntBASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 MIR548X2-201ENST00000579776 100 ntBASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 AC011471.1-201ENST00000585766 187 ntBASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 DEFB117-201ENST00000602356 141 ntBASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 AL162274.2-201ENST00000614406 332 ntBASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 AC096644.4-201ENST00000563417 2912 ntBASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 AC010332.2-201ENST00000613083 1904 ntBASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.2□□□□□ -1.9
LIMS2Q7Z4I7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 AC099654.7-201ENST00000635788 2127 ntBASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 RNU6-799P-201ENST00000363567 107 ntBASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 Y_RNA.261-201ENST00000364631 102 ntBASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 RNU6-1310P-201ENST00000384153 107 ntBASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 RNU6-381P-201ENST00000391259 108 ntBASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 Z92545.1-201ENST00000411782 234 ntBASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 AC114982.1-201ENST00000469402 321 ntBASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 AC091179.3-201ENST00000474761 144 ntBASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 AC100767.1-201ENST00000528178 123 ntBASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 AC007536.1-201ENST00000533382 349 ntBASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
LIMS2Q7Z4I7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 ADAM3A-203ENST00000461344 2157 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 RNU6-245P-201ENST00000384020 107 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 MIR607-201ENST00000385241 96 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 SNORA40-201ENST00000388090 126 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 MIR888-201ENST00000401186 77 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 EBAG9P1-201ENST00000418955 543 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 HMGN2P30-201ENST00000423237 256 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 RPL37P4-201ENST00000448908 268 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 SNRPGP7-201ENST00000469016 106 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 RNU6-155P-201ENST00000516347 100 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 AL356575.1-201ENST00000603008 283 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 AL033523.1-201ENST00000605153 153 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 AL359198.2-201ENST00000611836 194 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 AL078604.3-201ENST00000615580 211 ntBASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LIMS2Q7Z4I7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 AP003122.5-201ENST00000527668 3766 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 Y_RNA.127-201ENST00000363386 109 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 Y_RNA.218-201ENST00000364218 104 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 RNU6-793P-201ENST00000384233 104 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 SNORA46-201ENST00000384762 135 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 AL512633.1-201ENST00000399931 655 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 RNA5SP390-201ENST00000410191 113 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 MTND4LP9-201ENST00000427694 174 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 CR769767.1-201ENST00000436337 346 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 AC009163.5-201ENST00000575421 637 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 MIR4431-201ENST00000579990 94 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 AL451007.1-201ENST00000595491 289 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 MIR3529-201ENST00000637713 78 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 AL136164.4-201ENST00000625013 2135 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 GABRG2-229ENST00000641017 3628 ntBASIC3.17□□□□□ -1.9
LIMS2Q7Z4I7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LIMS2Q7Z4I7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms