Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC027288.2-201ENST00000553028 243 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 MIR5701-3-201ENST00000578890 82 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 MIR5002-201ENST00000584713 97 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 MIR5701-1-201ENST00000585138 82 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 AC025754.2-201ENST00000606491 432 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 MIR5701-2-201ENST00000615634 82 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 Y_RNA.48-201ENST00000362710 103 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 Y_RNA.405-201ENST00000383979 100 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 RNU6-245P-201ENST00000384020 107 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 Y_RNA.451-201ENST00000384200 100 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 Y_RNA.524-201ENST00000384564 100 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 Y_RNA.561-201ENST00000384694 100 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 MIR487A-201ENST00000385009 80 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 MIR300-201ENST00000401138 83 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 RNU6-370P-201ENST00000411008 104 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 MTCO3P8-201ENST00000453691 755 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 AC112492.4-201ENST00000456549 352 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 RNU6-875P-201ENST00000516488 106 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 Y_RNA.702-201ENST00000516843 96 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 SNORA44.1-201ENST00000517031 108 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 AP005660.1-201ENST00000522972 293 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 AC134698.4-201ENST00000523451 826 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 MIR4648-201ENST00000580107 72 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 MIR5006-201ENST00000583027 110 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 AC005014.2-201ENST00000607795 599 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 AC013412.1-201ENST00000610687 192 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 AC130454.1-201ENST00000622948 401 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 AL359757.2-201ENST00000624309 274 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 AL669831.3-213ENST00000636676 183 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 ZNF204P-201ENST00000416749 2397 ntBASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NUP54Q7Z3B4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 RNU6-541P-201ENST00000384709 110 ntBASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 MIR549A-201ENST00000385268 96 ntBASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 RNU6-1009P-201ENST00000390996 107 ntBASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 WARS2P1-201ENST00000429678 537 ntBASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 FGF7P4-201ENST00000509595 295 ntBASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 RNA5SP384-201ENST00000516615 116 ntBASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 AC022254.1-201ENST00000567857 235 ntBASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 MIR5690-201ENST00000583739 73 ntBASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 AC100812.1-201ENST00000607622 580 ntBASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 ZNF355P-201ENST00000427301 3216 ntBASIC1.95□□□□□ -2.1
NUP54Q7Z3B4 LINC02555-201ENST00000563933 1951 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 RNY1P16-201ENST00000363063 111 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 RNU6-1188P-201ENST00000363795 107 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 RNU6-331P-201ENST00000384724 107 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 AC004866.1-201ENST00000411748 78 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 AC009310.1-201ENST00000414414 451 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 MTCO3P29-201ENST00000432119 779 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 SNRPEP8-201ENST00000442866 260 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 AC007395.1-201ENST00000451333 677 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 RNU1-131P-201ENST00000458943 161 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 AC025033.1-201ENST00000463883 194 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 HMGB3P17-201ENST00000504195 649 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 RNU6-277P-201ENST00000516272 106 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 Y_RNA.706-201ENST00000516933 99 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 GNAI2P1-201ENST00000541815 315 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 MIR3198-2-201ENST00000577868 80 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 AC116312.1-201ENST00000606841 314 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 AL132765.2-201ENST00000610812 351 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 AC104260.1-201ENST00000616660 539 ntBASIC1.94□□□□□ -2.1
NUP54Q7Z3B4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 RNU6-545P-201ENST00000362681 104 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 RNU6-23P-201ENST00000363283 107 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 RNU5F-3P-201ENST00000363767 117 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 Y_RNA.263-201ENST00000364659 114 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 Y_RNA.387-201ENST00000383918 102 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 SNORA64-201ENST00000384674 134 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 MIR597-201ENST00000384968 97 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 RNU6-700P-201ENST00000391043 107 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 RNU6-159P-201ENST00000391080 106 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 MIR1283-1-201ENST00000408494 87 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 MTCYBP10-201ENST00000424905 650 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 MTATP6P23-201ENST00000440153 476 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 AC093019.1-201ENST00000443135 252 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms