Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 CBX3P7-201ENST00000532876 502 ntBASIC1.67□□□□□ -2.14
ZNF544Q6NX49 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.67□□□□□ -2.14
ZNF544Q6NX49 MIR5701-3-201ENST00000578890 82 ntBASIC1.67□□□□□ -2.14
ZNF544Q6NX49 MIR3618-201ENST00000580330 88 ntBASIC1.67□□□□□ -2.14
ZNF544Q6NX49 AC005899.2-201ENST00000584353 90 ntBASIC1.67□□□□□ -2.14
ZNF544Q6NX49 MIR5701-1-201ENST00000585138 82 ntBASIC1.67□□□□□ -2.14
ZNF544Q6NX49 AC025754.2-201ENST00000606491 432 ntBASIC1.67□□□□□ -2.14
ZNF544Q6NX49 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.67□□□□□ -2.14
ZNF544Q6NX49 PCGEM1.1-201ENST00000613431 131 ntBASIC1.67□□□□□ -2.14
ZNF544Q6NX49 MIR5701-2-201ENST00000615634 82 ntBASIC1.67□□□□□ -2.14
ZNF544Q6NX49 AC137590.2-201ENST00000619709 240 ntBASIC1.67□□□□□ -2.14
ZNF544Q6NX49 AC104985.2-201ENST00000620598 500 ntBASIC1.67□□□□□ -2.14
ZNF544Q6NX49 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.67□□□□□ -2.14
ZNF544Q6NX49 ZNF72P-201ENST00000425869 1908 ntBASIC1.67□□□□□ -2.14
ZNF544Q6NX49 snoU2_19.1-201ENST00000362361 80 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 RNA5SP276-201ENST00000362580 94 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 RNU4-79P-201ENST00000362764 141 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 SNORD115-8-201ENST00000363856 82 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 SNORD115-38-201ENST00000365037 82 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 Y_RNA.356-201ENST00000365475 113 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.66□□□□□ -2.14
ZNF544Q6NX49 Y_RNA.384-201ENST00000383909 102 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 Y_RNA.533-201ENST00000384596 114 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 MIR764-201ENST00000390811 85 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 RNY4P36-201ENST00000391116 96 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 RNU2-63P-201ENST00000410792 194 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.66□□□□□ -2.14
ZNF544Q6NX49 CBX3P6-201ENST00000430257 527 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 OR2AQ1P-201ENST00000451972 200 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 RN7SKP210-201ENST00000459176 261 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 Y_RNA.632-201ENST00000459189 102 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 SNORD19B-201ENST00000459623 84 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 FO393415.2-201ENST00000480085 343 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 RNU6-307P-201ENST00000516743 106 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 Y_RNA.718-201ENST00000517110 102 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 CBX3P8-201ENST00000532412 525 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 AC093027.1-201ENST00000546698 429 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 FRG2DP-202ENST00000566967 323 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 AC104581.2-201ENST00000572227 430 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.66□□□□□ -2.14
ZNF544Q6NX49 MIR4273-201ENST00000582824 84 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 MIR5690-201ENST00000583739 73 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 AC005014.2-201ENST00000607795 599 ntBASIC1.66□□□□□ -2.14
ZNF544Q6NX49 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.66□□□□□ -2.14
ZNF544Q6NX49 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
ZNF544Q6NX49 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ZNF544Q6NX49 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
ZNF544Q6NX49 RNU6-944P-201ENST00000364023 107 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 U8.10-201ENST00000384260 133 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.473-201ENST00000384333 102 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 RNU6-310P-201ENST00000384655 107 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 SNORA75.6-201ENST00000391318 127 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 RNU2-48P-201ENST00000410694 191 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.646-201ENST00000410980 101 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 AF228730.4-201ENST00000421457 183 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 AC096920.1-201ENST00000423991 241 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.65□□□□□ -2.15
ZNF544Q6NX49 AC007215.1-201ENST00000464893 276 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 AC087477.1-201ENST00000465747 340 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 RPL7P42-201ENST00000481005 679 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 AC145146.1-201ENST00000496370 254 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 AC097473.1-201ENST00000508142 408 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 RNA5SP384-201ENST00000516615 116 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.65□□□□□ -2.15
ZNF544Q6NX49 AL670379.2-201ENST00000604983 252 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 RMST_6.1-201ENST00000611980 203 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 MIR6845-201ENST00000613182 61 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 PISRT1.1-201ENST00000616930 107 ntBASIC1.65□□□□□ -2.15
ZNF544Q6NX49 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.65□□□□□ -2.15
ZNF544Q6NX49 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
ZNF544Q6NX49 RNU6-137P-201ENST00000363680 108 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 U3.9-201ENST00000363823 204 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 RNU6-1032P-201ENST00000384100 107 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 RNU6-17P-201ENST00000384245 107 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 RNU6-18P-201ENST00000384527 107 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 RNA5SP494-201ENST00000410653 129 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
ZNF544Q6NX49 snoU13.30-201ENST00000458951 104 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 AC018868.1-201ENST00000491307 315 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.64□□□□□ -2.15
ZNF544Q6NX49 AC107393.1-201ENST00000512403 346 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 AL590705.4-201ENST00000532209 134 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 EIF4A1P12-201ENST00000551910 141 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 AC110588.1-201ENST00000559699 137 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 MIR4795-201ENST00000584182 89 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 RPL17P51-201ENST00000605218 238 ntBASIC1.64□□□□□ -2.15
ZNF544Q6NX49 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
ZNF544Q6NX49 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ZNF544Q6NX49 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.2-201ENST00000362330 96 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 Y_RNA.61-201ENST00000362835 102 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 RNU1-23P-201ENST00000363361 144 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 RNU6-378P-201ENST00000384324 107 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 MIR561-201ENST00000385216 97 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
ZNF544Q6NX49 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.63□□□□□ -2.15
ZNF544Q6NX49 RNU2-20P-201ENST00000410425 191 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms