Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC012308.1-201ENST00000451232 178 ntBASIC3.74□□□□□ -1.81
RNF43Q68DV7 RNU7-170P-201ENST00000459303 61 ntBASIC3.74□□□□□ -1.81
RNF43Q68DV7 AC010401.1-201ENST00000463867 348 ntBASIC3.74□□□□□ -1.81
RNF43Q68DV7 AC011602.1-201ENST00000546484 331 ntBASIC3.74□□□□□ -1.81
RNF43Q68DV7 AC006199.1-201ENST00000548728 219 ntBASIC3.74□□□□□ -1.81
RNF43Q68DV7 AL162713.1-201ENST00000604480 262 ntBASIC3.74□□□□□ -1.81
RNF43Q68DV7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF43Q68DV7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF43Q68DV7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.74□□□□□ -1.81
RNF43Q68DV7 MIR6852-201ENST00000621699 66 ntBASIC3.74□□□□□ -1.81
RNF43Q68DV7 AC068647.2-201ENST00000637380 353 ntBASIC3.74□□□□□ -1.81
RNF43Q68DV7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.74□□□□□ -1.81
RNF43Q68DV7 CENPCP1-201ENST00000533085 2578 ntBASIC3.74□□□□□ -1.81
RNF43Q68DV7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF43Q68DV7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF43Q68DV7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
RNF43Q68DV7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RNF43Q68DV7 Y_RNA.243-201ENST00000364481 109 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 U8.7-201ENST00000364940 136 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 RNU6-1181P-201ENST00000384191 106 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 Y_RNA.456-201ENST00000384232 111 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 Y_RNA.584-201ENST00000391090 114 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 RNU6-1197P-201ENST00000391183 107 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 AL591034.1-201ENST00000407447 340 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 Y_RNA.630-201ENST00000411370 108 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 MTCO1P44-201ENST00000441935 243 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF43Q68DV7 RNU6-579P-201ENST00000516879 102 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 AC090142.3-201ENST00000519012 385 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF43Q68DV7 AC008011.1-201ENST00000545989 227 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF43Q68DV7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF43Q68DV7 AC090897.2-201ENST00000581715 130 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 AL031274.2-201ENST00000599419 203 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 SNORD98-201ENST00000636377 67 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 MIR7153-201ENST00000637758 57 ntBASIC3.73□□□□□ -1.81
RNF43Q68DV7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RNF43Q68DV7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF43Q68DV7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RNF43Q68DV7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RNF43Q68DV7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF43Q68DV7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF43Q68DV7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF43Q68DV7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF43Q68DV7 AC008555.8-201ENST00000623602 2168 ntBASIC3.72□□□□□ -1.81
RNF43Q68DV7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RNF43Q68DV7 AL365361.1-201ENST00000566942 3481 ntBASIC3.72□□□□□ -1.81
RNF43Q68DV7 MIR367-201ENST00000362299 68 ntBASIC3.72□□□□□ -1.81
RNF43Q68DV7 U3.9-201ENST00000363823 204 ntBASIC3.72□□□□□ -1.81
RNF43Q68DV7 AP002088.1-201ENST00000382740 395 ntBASIC3.72□□□□□ -1.81
RNF43Q68DV7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RNF43Q68DV7 RNA5SP390-201ENST00000410191 113 ntBASIC3.72□□□□□ -1.81
RNF43Q68DV7 RNU6-383P-201ENST00000410864 94 ntBASIC3.72□□□□□ -1.81
RNF43Q68DV7 RNA5SP120-201ENST00000410900 112 ntBASIC3.72□□□□□ -1.81
RNF43Q68DV7 RNU6-1282P-201ENST00000516735 96 ntBASIC3.72□□□□□ -1.81
RNF43Q68DV7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF43Q68DV7 AL670379.3-201ENST00000605040 251 ntBASIC3.72□□□□□ -1.81
RNF43Q68DV7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF43Q68DV7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF43Q68DV7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF43Q68DV7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RNF43Q68DV7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF43Q68DV7 PWAR6-201ENST00000552334 4618 ntBASIC3.72□□□□□ -1.81
RNF43Q68DV7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF43Q68DV7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF43Q68DV7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF43Q68DV7 Y_RNA.35-201ENST00000362601 101 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 Y_RNA.369-201ENST00000365568 117 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 RNU6-1336P-201ENST00000383886 109 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 RNU6-622P-201ENST00000384272 103 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 Y_RNA.495-201ENST00000384435 112 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 SNORD116-21-201ENST00000384507 92 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 MIR493-201ENST00000385254 89 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 EI24P2-201ENST00000397776 1076 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 CBX3P9-201ENST00000402326 552 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 RNU4-43P-201ENST00000410628 137 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 AC004866.1-201ENST00000411748 78 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 AC099548.1-201ENST00000421443 426 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 AL158147.1-201ENST00000443970 75 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 HMGN2P21-201ENST00000447764 270 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.71□□□□□ -1.82
RNF43Q68DV7 Y_RNA.651-201ENST00000459380 103 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 RPS27AP10-201ENST00000496103 208 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 AC120024.3-201ENST00000603167 156 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.71□□□□□ -1.82
RNF43Q68DV7 snoZ196.1-201ENST00000625269 89 ntBASIC3.71□□□□□ -1.82
RNF43Q68DV7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF43Q68DV7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF43Q68DV7 RNA5SP167-201ENST00000365461 116 ntBASIC3.7□□□□□ -1.82
RNF43Q68DV7 SNORA48.5-201ENST00000391143 135 ntBASIC3.7□□□□□ -1.82
RNF43Q68DV7 Y_RNA.622-201ENST00000411091 108 ntBASIC3.7□□□□□ -1.82
RNF43Q68DV7 AC017083.1-201ENST00000428093 483 ntBASIC3.7□□□□□ -1.82
RNF43Q68DV7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.7□□□□□ -1.82
RNF43Q68DV7 UBE2DNL-203ENST00000474922 222 ntBASIC3.7□□□□□ -1.82
RNF43Q68DV7 AC078817.1-201ENST00000492623 435 ntBASIC3.7□□□□□ -1.82
RNF43Q68DV7 AC023141.12-201ENST00000512399 199 ntBASIC3.7□□□□□ -1.82
RNF43Q68DV7 RNU6-1061P-201ENST00000516530 99 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms