Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RNU6-944P-201ENST00000364023 107 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 AC108019.1-201ENST00000512540 175 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 RNU6-947P-201ENST00000516264 106 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 USP9YP19-201ENST00000412165 485 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 USP9YP13-201ENST00000417797 480 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 AL139396.1-201ENST00000421137 167 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 AC002486.1-201ENST00000435098 391 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 LINC01399-202ENST00000458450 244 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 AC130509.1-201ENST00000464158 433 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 RPL39P38-201ENST00000467018 153 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 SNORA70.12-201ENST00000516084 153 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 ACA59.2-201ENST00000517061 156 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 AC027419.1-201ENST00000522976 328 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 AC246785.4-201ENST00000605374 287 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 AC080188.3-201ENST00000624842 748 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 AC010332.2-201ENST00000613083 1904 ntBASIC-0.58□□□□□ -2.5
RIF1Q5UIP0 SNORA72.2-201ENST00000365028 127 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 MIR487A-201ENST00000385009 80 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 PCNPP3-201ENST00000393579 471 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 AL133217.1-201ENST00000450980 425 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 RNA5SP481-201ENST00000516814 122 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 AC011979.2-201ENST00000527568 352 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 AC018926.1-201ENST00000616335 435 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 uc_338.19-201ENST00000616808 99 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 MIR499B-201ENST00000636498 73 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 RNU6-428P-201ENST00000362942 107 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 SNORA25.7-201ENST00000364375 127 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 AL392003.1-201ENST00000434394 243 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 snoU13.27-201ENST00000459278 104 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 AC022483.1-201ENST00000514020 567 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 RNU6-94P-201ENST00000607728 107 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.59□□□□□ -2.5
RIF1Q5UIP0 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 RNU6-679P-201ENST00000391003 106 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 ELOCP9-201ENST00000418624 239 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AL355994.1-201ENST00000424379 260 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AC133104.1-201ENST00000429100 218 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AL500527.2-201ENST00000454105 95 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 BNIP3P6-201ENST00000549284 499 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 Z99289.3-201ENST00000605586 594 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AC245008.1-201ENST00000608123 476 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AL136317.1-201ENST00000612653 226 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AC131159.1-201ENST00000621854 213 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AC098679.4-201ENST00000624241 654 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AC119674.1-220ENST00000641502 1048 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 Y_RNA.62-201ENST00000362840 99 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 SNORA75.1-201ENST00000391130 148 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 MIR873-201ENST00000401120 77 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 MIR8485-201ENST00000401372 91 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 MTND1P30-201ENST00000441241 901 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AC074133.1-201ENST00000515696 183 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AP003072.1-201ENST00000531740 145 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AC018630.3-201ENST00000542637 96 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 SUB1P2-201ENST00000556401 297 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AC004805.2-201ENST00000605382 482 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AP003072.5-201ENST00000623872 773 ntBASIC-0.6□□□□□ -2.51
RIF1Q5UIP0 AC106754.1-201ENST00000562632 1513 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 RNU2-33P-201ENST00000410344 192 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 ELOCP21-201ENST00000412558 336 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 AC244250.2-201ENST00000418731 148 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 AC007919.1-201ENST00000429380 217 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 MTND4LP10-201ENST00000435146 291 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 AC104695.3-201ENST00000604052 296 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 AL390208.1-201ENST00000605885 644 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 AL357078.3-201ENST00000607528 618 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 AC135803.1-201ENST00000608748 565 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 AL391903.3-201ENST00000612158 163 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 ZNF299P-201ENST00000406845 1804 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 MIR101-2-201ENST00000362195 79 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 AL109755.1-201ENST00000401791 649 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 MIR1827-201ENST00000408549 66 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 RNU4-27P-201ENST00000410889 139 ntBASIC-0.61□□□□□ -2.51
RIF1Q5UIP0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms