Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 Y_RNA.601-201ENST00000410500 113 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 AC096949.1-201ENST00000412047 152 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 AL161651.1-201ENST00000440882 223 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 RPL39P25-201ENST00000449384 154 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 AC107626.1-201ENST00000471084 183 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 AC097462.1-201ENST00000514125 324 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 AC026241.1-201ENST00000517873 2142 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 AC006130.2-201ENST00000586202 326 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 MIR6875-201ENST00000617506 72 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 AC004944.1-201ENST00000517807 3059 ntBASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNFT1Q5M7Z0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 Y_RNA.10-201ENST00000362371 110 ntBASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 RNU6-888P-201ENST00000363010 101 ntBASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 SNORA48.7-201ENST00000391302 135 ntBASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 RNA5SP246-201ENST00000458909 119 ntBASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 RPS29P19-201ENST00000479709 171 ntBASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 RN7SKP209-201ENST00000516888 304 ntBASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 AC022655.2-201ENST00000577280 318 ntBASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 HSPE1P7-201ENST00000604681 321 ntBASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 AC006435.5-201ENST00000624486 112 ntBASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 AL353746.1-201ENST00000566293 6881 ntBASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 AC010733.2-201ENST00000589496 5702 ntBASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNFT1Q5M7Z0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 AC007656.2-201ENST00000624902 4547 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 RNA5SP513-201ENST00000364648 118 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 RNU6-748P-201ENST00000384648 107 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 SNORA84-201ENST00000459229 133 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 RNA5SP57-201ENST00000459463 123 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 RNU7-57P-201ENST00000459540 60 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 AC080013.2-201ENST00000460866 323 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 AC096725.1-201ENST00000514266 313 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 HSPE1P18-201ENST00000517602 280 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 RN7SL703P-201ENST00000578485 302 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 MIR3690-201ENST00000580266 75 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 AC012531.5-201ENST00000611375 151 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 MIR7151-201ENST00000617477 60 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 MIR3199-2-201ENST00000636243 86 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 AC000403.1-201ENST00000613696 3585 ntBASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNFT1Q5M7Z0 FAM35BP-202ENST00000497389 3337 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 RNU6-486P-201ENST00000363116 107 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 Y_RNA.437-201ENST00000384113 113 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 SNORD61-201ENST00000384252 73 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 YME1L1P1-201ENST00000429435 297 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 VDAC1P3-201ENST00000434069 851 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 AC069285.2-201ENST00000440210 275 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 RNU6-221P-201ENST00000459541 99 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 RN7SL604P-201ENST00000492589 296 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 RNU7-61P-201ENST00000515897 61 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 AC024220.1-201ENST00000603675 484 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 AC069200.1-201ENST00000609511 323 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 U6.73-201ENST00000619194 103 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 AC058791.1-201ENST00000608412 3198 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms