Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
ALFQ53S48 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
ALFQ53S48 CENPCP1-201ENST00000533085 2578 ntBASIC2.19□□□□□ -2.06
ALFQ53S48 RNU6-862P-201ENST00000362804 105 ntBASIC2.19□□□□□ -2.06
ALFQ53S48 RNU6-595P-201ENST00000363944 107 ntBASIC2.19□□□□□ -2.06
ALFQ53S48 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ALFQ53S48 RPS3AP52-201ENST00000435639 297 ntBASIC2.19□□□□□ -2.06
ALFQ53S48 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.19□□□□□ -2.06
ALFQ53S48 AC011406.1-201ENST00000512440 370 ntBASIC2.19□□□□□ -2.06
ALFQ53S48 AC046134.1-201ENST00000514454 666 ntBASIC2.19□□□□□ -2.06
ALFQ53S48 AC010900.2-201ENST00000604508 210 ntBASIC2.19□□□□□ -2.06
ALFQ53S48 AC018462.2-201ENST00000605375 395 ntBASIC2.19□□□□□ -2.06
ALFQ53S48 CASC19-280ENST00000642102 1351 ntBASIC2.19□□□□□ -2.06
ALFQ53S48 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
ALFQ53S48 RNU1-62P-201ENST00000362599 164 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 RNU6-873P-201ENST00000363833 107 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 RNU1-96P-201ENST00000364163 162 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 Y_RNA.248-201ENST00000364501 109 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 RNU6-842P-201ENST00000384269 107 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 MIR548K-201ENST00000408406 116 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 RN7SKP192-201ENST00000411291 327 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 WARS2P1-201ENST00000429678 537 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 AC010409.1-201ENST00000487382 476 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 Y_RNA.706-201ENST00000516933 99 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 MIR4648-201ENST00000580107 72 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 AC005858.4-201ENST00000623191 700 ntBASIC2.18□□□□□ -2.06
ALFQ53S48 ZNF720P1-201ENST00000562403 1939 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 Y_RNA.405-201ENST00000383979 100 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 RNU6-767P-201ENST00000384132 107 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 Y_RNA.451-201ENST00000384200 100 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 Y_RNA.524-201ENST00000384564 100 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 Y_RNA.561-201ENST00000384694 100 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ALFQ53S48 AC060773.1-201ENST00000421698 310 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 OOSP1P1-201ENST00000423265 274 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 AL445305.1-201ENST00000432577 575 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 AC112492.4-201ENST00000456549 352 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 RNU7-57P-201ENST00000459540 60 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 SNORA31.17-201ENST00000516953 127 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 SNORA44.1-201ENST00000517031 108 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 AC104581.2-201ENST00000572227 430 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 AC011494.1-201ENST00000596454 237 ntBASIC2.17□□□□□ -2.06
ALFQ53S48 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.17□□□□□ -2.06
ALFQ53S48 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ALFQ53S48 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
ALFQ53S48 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ALFQ53S48 Y_RNA.2-201ENST00000362330 96 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 RNU6-112P-201ENST00000363599 104 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 Y_RNA.160-201ENST00000363677 92 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 RNU6-159P-201ENST00000391080 106 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 AL079342.1-201ENST00000401460 267 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 RNU2-40P-201ENST00000410833 196 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 RNU6-57P-201ENST00000411348 103 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 RPL37P10-201ENST00000412884 288 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 EBAG9P1-201ENST00000418955 543 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 AC099677.2-201ENST00000436385 175 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.16□□□□□ -2.06
ALFQ53S48 AC026782.1-201ENST00000512952 449 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 RNU6-1146P-201ENST00000516282 102 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 RNA5SP384-201ENST00000516615 116 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 AC100812.1-201ENST00000607622 580 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 AL353149.1-201ENST00000610667 244 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 AC006001.4-201ENST00000622243 395 ntBASIC2.16□□□□□ -2.06
ALFQ53S48 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.16□□□□□ -2.06
ALFQ53S48 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 Y_RNA.48-201ENST00000362710 103 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 SNORA67.2-201ENST00000384300 149 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 RNU6-601P-201ENST00000384540 107 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 RNU6-876P-201ENST00000391295 104 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 AL139156.1-201ENST00000412785 841 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ALFQ53S48 AC007098.1-201ENST00000420122 367 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 MTCO3P29-201ENST00000432119 779 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 Y_RNA.708-201ENST00000516950 96 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 CBX3P8-201ENST00000532412 525 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 UBL5P4-201ENST00000562584 236 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.15□□□□□ -2.07
ALFQ53S48 AC002984.1-201ENST00000591692 448 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 AC103810.8-201ENST00000607347 118 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 AC098657.3-201ENST00000620434 263 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 snoZ196.1-201ENST00000625269 89 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 AC068205.3-201ENST00000636385 468 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 MIR219B-201ENST00000637023 88 ntBASIC2.15□□□□□ -2.07
ALFQ53S48 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ALFQ53S48 MTND4P12-201ENST00000498999 1377 ntBASIC2.14□□□□□ -2.07
ALFQ53S48 RNU6-1019P-201ENST00000364424 107 ntBASIC2.14□□□□□ -2.07
ALFQ53S48 MIR520A-201ENST00000384862 85 ntBASIC2.14□□□□□ -2.07
ALFQ53S48 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ALFQ53S48 MIR1253-201ENST00000408273 105 ntBASIC2.14□□□□□ -2.07
ALFQ53S48 Y_RNA.594-201ENST00000410373 140 ntBASIC2.14□□□□□ -2.07
ALFQ53S48 RNU6-1050P-201ENST00000410388 107 ntBASIC2.14□□□□□ -2.07
ALFQ53S48 RNU2-7P-201ENST00000410794 178 ntBASIC2.14□□□□□ -2.07
ALFQ53S48 MTND1P2-201ENST00000430604 821 ntBASIC2.14□□□□□ -2.07
ALFQ53S48 AP000870.1-201ENST00000472927 406 ntBASIC2.14□□□□□ -2.07
ALFQ53S48 RNU7-30P-201ENST00000516835 62 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms