Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SNORD53B-201ENST00000577887 78 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 MIR5094-201ENST00000578766 85 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.32□□□□□ -2.2
RFX4Q33E94 AC104984.5-201ENST00000586878 94 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.32□□□□□ -2.2
RFX4Q33E94 AC090517.2-201ENST00000614966 680 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 MIR7843-201ENST00000622274 79 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 AC068205.3-201ENST00000636385 468 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 AL159152.1-201ENST00000635019 2587 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 RNU6-112P-201ENST00000363599 104 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 RNU6-877P-201ENST00000383868 107 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 RNU6-1215P-201ENST00000384441 102 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 RNU6-831P-201ENST00000384548 107 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 RNU6-296P-201ENST00000384608 107 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 MIR517A-201ENST00000385001 87 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
RFX4Q33E94 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
RFX4Q33E94 SNORD115-47-201ENST00000391226 86 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 MIR1323-201ENST00000408090 73 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 AL591806.2-201ENST00000433122 173 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
RFX4Q33E94 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.31□□□□□ -2.2
RFX4Q33E94 PCMTD1P1-201ENST00000455560 355 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 RPS29P23-201ENST00000458635 123 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.31□□□□□ -2.2
RFX4Q33E94 TRBVA-201ENST00000498804 316 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 MTCO2P30-201ENST00000503662 364 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 Y_RNA.655-201ENST00000515919 96 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 RNU6-856P-201ENST00000516959 98 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.31□□□□□ -2.2
RFX4Q33E94 AL160236.1-201ENST00000556317 195 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 MIR5006-201ENST00000583027 110 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 AP000907.4-201ENST00000604143 237 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 AC083806.3-201ENST00000614016 455 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 TCL6_2.1-201ENST00000615162 119 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 SCARNA4-201ENST00000629045 128 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 MIR3688-2-201ENST00000636963 87 ntBASIC1.31□□□□□ -2.2
RFX4Q33E94 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RFX4Q33E94 Y_RNA.295-201ENST00000364918 102 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 SNORD116-11-201ENST00000383882 92 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 RNU6-790P-201ENST00000384479 105 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 SNORA67.6-201ENST00000391093 99 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 AL117342.1-201ENST00000404861 406 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.3□□□□□ -2.2
RFX4Q33E94 AC060773.1-201ENST00000421698 310 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RFX4Q33E94 AL354695.1-201ENST00000427935 228 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 AC245047.4-201ENST00000433189 144 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 AC015922.2-201ENST00000435593 184 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 AC016717.1-201ENST00000448918 286 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 SNORD13-201ENST00000459299 104 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.3□□□□□ -2.2
RFX4Q33E94 RNU6-1088P-201ENST00000516850 104 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 RNU6-1314P-201ENST00000517139 104 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 SNORA31.24-201ENST00000517232 57 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.3□□□□□ -2.2
RFX4Q33E94 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.3□□□□□ -2.2
RFX4Q33E94 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.3□□□□□ -2.2
RFX4Q33E94 AC026470.2-201ENST00000561492 181 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.3□□□□□ -2.2
RFX4Q33E94 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 AC100810.6-201ENST00000638068 285 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 AL161722.3-201ENST00000605789 2983 ntBASIC1.3□□□□□ -2.2
RFX4Q33E94 RNU6-862P-201ENST00000362804 105 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 RNU6-306P-201ENST00000384617 107 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 RNU6-373P-201ENST00000411247 98 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 DAP3P1-201ENST00000441522 278 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 SNRPGP13-201ENST00000442212 177 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 AL353572.1-201ENST00000442490 417 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 AC009237.7-201ENST00000447357 229 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 ATP5J2P3-201ENST00000451550 258 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.29□□□□□ -2.2
RFX4Q33E94 snoU13.23-201ENST00000458863 104 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 HMGN2P9-201ENST00000476875 229 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 AC067942.3-201ENST00000512025 362 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 RNU6-1041P-201ENST00000516254 102 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 RNU6-864P-201ENST00000516256 108 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 RNU6-273P-201ENST00000516937 96 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 SUMO2P18-201ENST00000518873 252 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.29□□□□□ -2.2
RFX4Q33E94 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.29□□□□□ -2.2
RFX4Q33E94 RRN3P3-201ENST00000549207 578 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.29□□□□□ -2.2
RFX4Q33E94 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.29□□□□□ -2.2
RFX4Q33E94 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.29□□□□□ -2.2
RFX4Q33E94 MIR6715A-201ENST00000615929 79 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 U4.5-201ENST00000617137 123 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 AC245060.5-201ENST00000610778 3293 ntBASIC1.29□□□□□ -2.2
RFX4Q33E94 Y_RNA.132-201ENST00000363421 102 ntBASIC1.28□□□□□ -2.2
RFX4Q33E94 RNU6-60P-201ENST00000364792 103 ntBASIC1.28□□□□□ -2.2
RFX4Q33E94 SNORA67.2-201ENST00000384300 149 ntBASIC1.28□□□□□ -2.2
RFX4Q33E94 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
RFX4Q33E94 MIR300-201ENST00000401138 83 ntBASIC1.28□□□□□ -2.2
RFX4Q33E94 RNA5SP504-201ENST00000410676 117 ntBASIC1.28□□□□□ -2.2
RFX4Q33E94 RPL21P111-201ENST00000418453 477 ntBASIC1.28□□□□□ -2.2
RFX4Q33E94 NCOR1P3-201ENST00000420479 303 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms