Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AC087683.1-201ENST00000591187 441 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 AL354950.2-201ENST00000617939 290 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 AC068647.2-201ENST00000637380 353 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 Y_RNA.123-201ENST00000363338 102 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 RNU1-124P-201ENST00000363861 145 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 RNU6-1329P-201ENST00000365664 107 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 RNU5A-6P-201ENST00000384136 116 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 SNORA67.2-201ENST00000384300 149 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 RNU6-1158P-201ENST00000391167 107 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 AL606923.1-201ENST00000406616 190 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 AC108667.1-201ENST00000428618 249 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.8□□□□□ -2.28
SSX1Q16384 U8.21-201ENST00000459536 136 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 RNU7-57P-201ENST00000459540 60 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 MTCO3P38-201ENST00000468910 766 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 RNU6-189P-201ENST00000516120 101 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 SNORA31.10-201ENST00000516482 106 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 RNU6-165P-201ENST00000517170 99 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 AC104576.1-201ENST00000524225 88 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.8□□□□□ -2.28
SSX1Q16384 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SSX1Q16384 SCOCP1-201ENST00000554676 349 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 MTATP6P24-201ENST00000576835 677 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 MIR4528-201ENST00000577763 90 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 AL391646.1-201ENST00000603860 190 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 AL022345.2-201ENST00000606307 135 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 BX284668.6-201ENST00000606899 438 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 AC004492.1-201ENST00000607036 742 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 U6.108-201ENST00000637764 58 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 MTND4P5-201ENST00000435821 1374 ntBASIC0.8□□□□□ -2.28
SSX1Q16384 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SSX1Q16384 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SSX1Q16384 RNU6-1103P-201ENST00000384150 107 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 RNU6-348P-201ENST00000384386 107 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
SSX1Q16384 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
SSX1Q16384 MIR1253-201ENST00000408273 105 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 RNU6-57P-201ENST00000411348 103 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 AC016909.1-201ENST00000415916 166 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.79□□□□□ -2.28
SSX1Q16384 AC010154.1-201ENST00000425857 269 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 AC074290.1-201ENST00000448883 135 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 TPTE2P5-203ENST00000458118 728 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 AF186996.7-201ENST00000492781 209 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 CYCSP23-201ENST00000519781 313 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.79□□□□□ -2.28
SSX1Q16384 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.79□□□□□ -2.28
SSX1Q16384 AP000942.3-201ENST00000603702 160 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 SNRPGP20-201ENST00000604477 205 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.79□□□□□ -2.28
SSX1Q16384 AC103705.1-201ENST00000619013 241 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.79□□□□□ -2.28
SSX1Q16384 OR5AK4P-201ENST00000635912 903 ntBASIC0.79□□□□□ -2.28
SSX1Q16384 Y_RNA.169-201ENST00000363745 96 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 RNU6-82P-201ENST00000363970 107 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 RNU6-950P-201ENST00000384651 107 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 RNU6-1031P-201ENST00000384773 107 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 MIR764-201ENST00000390811 85 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 RNA5SP323-201ENST00000391094 133 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.78□□□□□ -2.28
SSX1Q16384 BTF3P4-201ENST00000418852 495 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.78□□□□□ -2.28
SSX1Q16384 MTCO2P19-201ENST00000427513 598 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 TIMM9P3-201ENST00000428659 274 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.78□□□□□ -2.28
SSX1Q16384 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.78□□□□□ -2.28
SSX1Q16384 RPL39P38-201ENST00000467018 153 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 AL163540.1-201ENST00000485382 386 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 AC103851.1-201ENST00000506833 274 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 AC025423.5-201ENST00000550230 219 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 AL390123.1-201ENST00000603216 237 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 AC022217.4-201ENST00000604389 163 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 AC097065.2-201ENST00000608159 533 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.78□□□□□ -2.28
SSX1Q16384 FER-210ENST00000628534 558 ntTSL 5 BASIC0.78□□□□□ -2.28
SSX1Q16384 SCARNA4-201ENST00000629045 128 ntBASIC0.78□□□□□ -2.28
SSX1Q16384 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.77□□□□□ -2.29
SSX1Q16384 Y_RNA.381-201ENST00000365666 102 ntBASIC0.77□□□□□ -2.29
SSX1Q16384 MIR532-201ENST00000385025 91 ntBASIC0.77□□□□□ -2.29
SSX1Q16384 AL049545.1-201ENST00000401856 572 ntBASIC0.77□□□□□ -2.29
SSX1Q16384 RN7SKP142-201ENST00000411236 328 ntBASIC0.77□□□□□ -2.29
SSX1Q16384 CDK8P2-201ENST00000415020 547 ntBASIC0.77□□□□□ -2.29
SSX1Q16384 AL353193.1-201ENST00000421444 268 ntBASIC0.77□□□□□ -2.29
SSX1Q16384 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.77□□□□□ -2.29
SSX1Q16384 UBL5P1-201ENST00000507979 193 ntBASIC0.77□□□□□ -2.29
SSX1Q16384 RNU6-1038P-201ENST00000516516 104 ntBASIC0.77□□□□□ -2.29
SSX1Q16384 AC025647.1-201ENST00000517879 253 ntBASIC0.77□□□□□ -2.29
SSX1Q16384 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SSX1Q16384 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.77□□□□□ -2.29
SSX1Q16384 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.77□□□□□ -2.29
SSX1Q16384 MIR5692C1-201ENST00000585309 91 ntBASIC0.77□□□□□ -2.29
SSX1Q16384 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.77□□□□□ -2.29
SSX1Q16384 AL078596.1-201ENST00000624856 447 ntBASIC0.77□□□□□ -2.29
SSX1Q16384 AC008873.1-201ENST00000625051 138 ntBASIC0.77□□□□□ -2.29
SSX1Q16384 snoZ196.1-201ENST00000625269 89 ntBASIC0.77□□□□□ -2.29
SSX1Q16384 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
SSX1Q16384 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
SSX1Q16384 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms