Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RNA5SP219-201ENST00000390940 113 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 RNU6-1093P-201ENST00000391194 107 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
FOXF1Q12946 RNU2-7P-201ENST00000410794 178 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 AC090960.1-201ENST00000421072 306 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 AC060773.1-201ENST00000421698 310 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 MTCO1P20-201ENST00000425366 358 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 AL135790.2-201ENST00000437701 267 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 snoU13.27-201ENST00000459278 104 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 RNU6-261P-201ENST00000459506 102 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 AC083798.1-201ENST00000472671 131 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 AC024995.1-201ENST00000523014 93 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 SNORA59B-202ENST00000578183 701 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 AC100830.2-201ENST00000581636 240 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 MIR4753-201ENST00000585119 83 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 AP003465.2-201ENST00000602571 373 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 AC073648.5-201ENST00000603502 305 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 MIR3976-201ENST00000606807 139 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 AC137590.2-201ENST00000619709 240 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 Z69908.1-201ENST00000622603 247 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 AC139792.3-201ENST00000623525 224 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 MIR338-201ENST00000636369 67 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 MTND4P5-201ENST00000435821 1374 ntBASIC0.78□□□□□ -2.28
FOXF1Q12946 AC121333.1-201ENST00000567488 2709 ntBASIC0.78□□□□□ -2.29
FOXF1Q12946 Y_RNA.1-201ENST00000352915 104 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
FOXF1Q12946 RNU6-545P-201ENST00000362681 104 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 RNU1-93P-201ENST00000364704 169 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 RNU6-877P-201ENST00000383868 107 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 MIR548B-201ENST00000385247 97 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 SNORD73A-201ENST00000386062 65 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
FOXF1Q12946 Y_RNA.582-201ENST00000391023 95 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.77□□□□□ -2.29
FOXF1Q12946 AL353193.1-201ENST00000421444 268 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.77□□□□□ -2.29
FOXF1Q12946 AL359672.1-201ENST00000442302 409 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 AC074290.1-201ENST00000448883 135 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.77□□□□□ -2.29
FOXF1Q12946 RNU6-956P-201ENST00000458868 103 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 snoU13.30-201ENST00000458951 104 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 Y_RNA.654-201ENST00000497848 106 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 RN7SKP298-201ENST00000515950 94 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 RNU6-1146P-201ENST00000516282 102 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 RNU6-323P-201ENST00000521915 107 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.77□□□□□ -2.29
FOXF1Q12946 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.77□□□□□ -2.29
FOXF1Q12946 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.77□□□□□ -2.29
FOXF1Q12946 CPDP1-201ENST00000579660 283 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 AC008088.1-201ENST00000580993 280 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 AC063944.3-201ENST00000609969 533 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 AL354950.2-201ENST00000617939 290 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 AC008873.1-201ENST00000625051 138 ntBASIC0.77□□□□□ -2.29
FOXF1Q12946 MIR373-201ENST00000362273 69 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 snoU2-30.2-201ENST00000362805 70 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 Y_RNA.77-201ENST00000362962 107 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 RNU6-38P-201ENST00000384085 107 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 RNU6-784P-201ENST00000384330 106 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 Y_RNA.481-201ENST00000384373 102 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 MRPL35P1-201ENST00000404272 572 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.76□□□□□ -2.29
FOXF1Q12946 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.76□□□□□ -2.29
FOXF1Q12946 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.76□□□□□ -2.29
FOXF1Q12946 NFU1P2-201ENST00000448700 469 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.76□□□□□ -2.29
FOXF1Q12946 TPTE2P5-203ENST00000458118 728 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 RPS3AP17-201ENST00000472594 777 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 RNU6-1041P-201ENST00000516254 102 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 RNA5SP384-201ENST00000516615 116 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 RNU6-344P-201ENST00000516635 111 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.76□□□□□ -2.29
FOXF1Q12946 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
FOXF1Q12946 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
FOXF1Q12946 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.76□□□□□ -2.29
FOXF1Q12946 MIR5692C1-201ENST00000585309 91 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 AC016727.2-201ENST00000603988 621 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 AC211469.2-201ENST00000605461 205 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 AC104458.1-201ENST00000608243 463 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 AC064836.2-201ENST00000609491 462 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 AC009509.4-201ENST00000619202 509 ntBASIC0.76□□□□□ -2.29
FOXF1Q12946 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.76□□□□□ -2.29
FOXF1Q12946 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.76□□□□□ -2.29
FOXF1Q12946 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.76□□□□□ -2.29
FOXF1Q12946 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.75□□□□□ -2.29
FOXF1Q12946 SNORD115-8-201ENST00000363856 82 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 RNU6-1322P-201ENST00000364309 107 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 SNORD115-38-201ENST00000365037 82 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 RNU6-418P-201ENST00000384035 107 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 RNU6-950P-201ENST00000384651 107 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 Y_RNA.553-201ENST00000384670 102 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 MIR514A2-201ENST00000385131 88 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 MIR514A3-201ENST00000385132 88 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 RNA5SP494-201ENST00000410653 129 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 AL606489.2-201ENST00000433886 234 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 AC004386.2-201ENST00000441858 148 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 RNU6-1208P-201ENST00000459588 107 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 RPL39P28-201ENST00000465655 155 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms