Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MIR3192-201ENST00000584920 77 ntBASIC-1.4□□□□□ -2.63
TFF3Q07654 AC019226.1-201ENST00000625666 515 ntBASIC-1.4□□□□□ -2.63
TFF3Q07654 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.41□□□□□ -2.64
TFF3Q07654 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.41□□□□□ -2.64
TFF3Q07654 SNORD32B-201ENST00000364460 84 ntBASIC-1.41□□□□□ -2.64
TFF3Q07654 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.41□□□□□ -2.64
TFF3Q07654 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.41□□□□□ -2.64
TFF3Q07654 RNU6-1300P-201ENST00000391046 108 ntBASIC-1.41□□□□□ -2.64
TFF3Q07654 MTCO3P1-205ENST00000422088 832 ntBASIC-1.41□□□□□ -2.64
TFF3Q07654 RPL39P34-201ENST00000477141 156 ntBASIC-1.41□□□□□ -2.64
TFF3Q07654 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-1.41□□□□□ -2.64
TFF3Q07654 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.42□□□□□ -2.64
TFF3Q07654 RNU6-622P-201ENST00000384272 103 ntBASIC-1.42□□□□□ -2.64
TFF3Q07654 GPM6BP2-201ENST00000432046 144 ntBASIC-1.42□□□□□ -2.64
TFF3Q07654 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-1.42□□□□□ -2.64
TFF3Q07654 AC119618.1-201ENST00000434191 222 ntBASIC-1.42□□□□□ -2.64
TFF3Q07654 GPM6BP1-201ENST00000446387 144 ntBASIC-1.42□□□□□ -2.64
TFF3Q07654 RNA5SP180-201ENST00000516181 101 ntBASIC-1.42□□□□□ -2.64
TFF3Q07654 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.42□□□□□ -2.64
TFF3Q07654 AC023632.1-201ENST00000518463 375 ntBASIC-1.42□□□□□ -2.64
TFF3Q07654 AL161798.1-201ENST00000604630 131 ntBASIC-1.42□□□□□ -2.64
TFF3Q07654 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.42□□□□□ -2.64
TFF3Q07654 AC010133.1-201ENST00000615809 842 ntBASIC-1.42□□□□□ -2.64
TFF3Q07654 AC106754.1-201ENST00000562632 1513 ntBASIC-1.43□□□□□ -2.64
TFF3Q07654 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.43□□□□□ -2.64
TFF3Q07654 RNY4P6-201ENST00000363667 96 ntBASIC-1.43□□□□□ -2.64
TFF3Q07654 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.43□□□□□ -2.64
TFF3Q07654 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-1.43□□□□□ -2.64
TFF3Q07654 MIR4782-201ENST00000577987 79 ntBASIC-1.43□□□□□ -2.64
TFF3Q07654 uc_338.19-201ENST00000616808 99 ntBASIC-1.43□□□□□ -2.64
TFF3Q07654 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-1.43□□□□□ -2.64
TFF3Q07654 MIR655-201ENST00000362159 97 ntBASIC-1.44□□□□□ -2.64
TFF3Q07654 AL592310.1-201ENST00000414330 671 ntBASIC-1.44□□□□□ -2.64
TFF3Q07654 AL590135.1-201ENST00000422215 156 ntBASIC-1.44□□□□□ -2.64
TFF3Q07654 AC019205.3-201ENST00000424573 156 ntBASIC-1.44□□□□□ -2.64
TFF3Q07654 AC010154.1-201ENST00000425857 269 ntBASIC-1.44□□□□□ -2.64
TFF3Q07654 FO393419.3-201ENST00000428741 282 ntBASIC-1.44□□□□□ -2.64
TFF3Q07654 RPL31P54-201ENST00000429803 370 ntBASIC-1.44□□□□□ -2.64
TFF3Q07654 AC016700.2-201ENST00000446011 156 ntBASIC-1.44□□□□□ -2.64
TFF3Q07654 BTF3P15-201ENST00000455606 336 ntBASIC-1.44□□□□□ -2.64
TFF3Q07654 AC015911.1-201ENST00000495111 156 ntBASIC-1.44□□□□□ -2.64
TFF3Q07654 RNU6-158P-201ENST00000517104 100 ntBASIC-1.44□□□□□ -2.64
TFF3Q07654 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.44□□□□□ -2.64
TFF3Q07654 RNU6-188P-201ENST00000364207 107 ntBASIC-1.45□□□□□ -2.64
TFF3Q07654 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.45□□□□□ -2.64
TFF3Q07654 MIR563-201ENST00000385080 79 ntBASIC-1.45□□□□□ -2.64
TFF3Q07654 AC092809.3-201ENST00000415453 231 ntBASIC-1.45□□□□□ -2.64
TFF3Q07654 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.45□□□□□ -2.64
TFF3Q07654 MTCO1P5-201ENST00000433573 344 ntBASIC-1.45□□□□□ -2.64
TFF3Q07654 LRRC6P1-201ENST00000532188 885 ntBASIC-1.45□□□□□ -2.64
TFF3Q07654 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-1.45□□□□□ -2.64
TFF3Q07654 AC093519.1-201ENST00000566109 298 ntBASIC-1.45□□□□□ -2.64
TFF3Q07654 MIR3152-201ENST00000579801 74 ntBASIC-1.45□□□□□ -2.64
TFF3Q07654 BNIP3P30-201ENST00000601184 574 ntBASIC-1.45□□□□□ -2.64
TFF3Q07654 AC011374.2-201ENST00000607135 526 ntBASIC-1.45□□□□□ -2.64
TFF3Q07654 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-1.45□□□□□ -2.64
TFF3Q07654 AL450472.1-202ENST00000637286 180 ntBASIC-1.45□□□□□ -2.64
TFF3Q07654 SNORA72.1-201ENST00000363485 129 ntBASIC-1.46□□□□□ -2.64
TFF3Q07654 RNU6-187P-201ENST00000384139 106 ntBASIC-1.46□□□□□ -2.64
TFF3Q07654 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.46□□□□□ -2.64
TFF3Q07654 MTND1P14-201ENST00000427400 950 ntBASIC-1.46□□□□□ -2.64
TFF3Q07654 OFD1P3Y-201ENST00000453312 783 ntBASIC-1.46□□□□□ -2.64
TFF3Q07654 snoU109.2-201ENST00000459316 135 ntBASIC-1.46□□□□□ -2.64
TFF3Q07654 RNU6-856P-201ENST00000516959 98 ntBASIC-1.46□□□□□ -2.64
TFF3Q07654 AC090186.1-201ENST00000605991 572 ntBASIC-1.46□□□□□ -2.64
TFF3Q07654 AL118556.2-201ENST00000614375 824 ntBASIC-1.46□□□□□ -2.64
TFF3Q07654 SNORD32A-201ENST00000364805 84 ntBASIC-1.47□□□□□ -2.64
TFF3Q07654 DEFB130D-201ENST00000426866 237 ntBASIC-1.47□□□□□ -2.64
TFF3Q07654 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.47□□□□□ -2.64
TFF3Q07654 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1.47□□□□□ -2.64
TFF3Q07654 AC048346.1-201ENST00000510247 144 ntBASIC-1.47□□□□□ -2.64
TFF3Q07654 AC090572.1-201ENST00000519251 160 ntBASIC-1.47□□□□□ -2.64
TFF3Q07654 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-1.47□□□□□ -2.64
TFF3Q07654 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-1.47□□□□□ -2.64
TFF3Q07654 SNRPGP1-201ENST00000553864 222 ntBASIC-1.47□□□□□ -2.64
TFF3Q07654 MIR4778-201ENST00000577635 80 ntBASIC-1.47□□□□□ -2.64
TFF3Q07654 AL357080.1-201ENST00000617394 239 ntBASIC-1.47□□□□□ -2.64
TFF3Q07654 MIR6514-201ENST00000622549 70 ntBASIC-1.47□□□□□ -2.64
TFF3Q07654 AP003072.5-201ENST00000623872 773 ntBASIC-1.47□□□□□ -2.64
TFF3Q07654 MIR6828-201ENST00000636181 60 ntBASIC-1.47□□□□□ -2.64
TFF3Q07654 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.48□□□□□ -2.65
TFF3Q07654 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 RNU6-438P-201ENST00000365561 103 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 SNORA32.2-201ENST00000384049 122 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 SNORA12.2-201ENST00000391040 156 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 BTF3L4P3-201ENST00000418879 476 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-1.48□□□□□ -2.65
TFF3Q07654 AL356583.2-201ENST00000426536 280 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 USP9YP11-201ENST00000427537 717 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-1.48□□□□□ -2.65
TFF3Q07654 MTND4P15-201ENST00000437913 1033 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-1.48□□□□□ -2.65
TFF3Q07654 AL163973.1-201ENST00000484753 577 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-1.48□□□□□ -2.65
TFF3Q07654 AC024995.1-201ENST00000523014 93 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 TMF1P1-201ENST00000576058 373 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 AC063944.3-201ENST00000609969 533 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 AL442067.1-201ENST00000613261 223 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.48□□□□□ -2.65
TFF3Q07654 AL356094.1-201ENST00000624663 1212 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms