Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.78□□□□□ -2.12
GABPAQ06546 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.78□□□□□ -2.12
GABPAQ06546 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.78□□□□□ -2.12
GABPAQ06546 AC005034.5-201ENST00000604219 466 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 uc_338.5-201ENST00000611839 155 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 AL773524.1-201ENST00000614065 229 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 AC006504.8-201ENST00000621046 635 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.78□□□□□ -2.12
GABPAQ06546 RNU1-76P-201ENST00000362903 159 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 Y_RNA.132-201ENST00000363421 102 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 RNU6-306P-201ENST00000384617 107 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
GABPAQ06546 RNA5SP501-201ENST00000410990 112 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 AL158823.1-201ENST00000418441 478 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 AC139712.2-201ENST00000424302 339 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 AL353689.1-201ENST00000438895 199 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 AC004386.2-201ENST00000441858 148 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.77□□□□□ -2.13
GABPAQ06546 OR2AQ1P-201ENST00000451972 200 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.77□□□□□ -2.13
GABPAQ06546 RNU4-49P-201ENST00000516080 140 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 RNU6-566P-201ENST00000516790 107 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 AC087441.2-201ENST00000529141 262 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.77□□□□□ -2.13
GABPAQ06546 MIR5006-201ENST00000583027 110 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 AC005562.2-201ENST00000618264 111 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 U1.36-201ENST00000620684 176 ntBASIC1.77□□□□□ -2.13
GABPAQ06546 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.77□□□□□ -2.13
GABPAQ06546 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.77□□□□□ -2.13
GABPAQ06546 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
GABPAQ06546 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
GABPAQ06546 RNU6-545P-201ENST00000362681 104 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
GABPAQ06546 RNA5SP212-201ENST00000391223 107 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
GABPAQ06546 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.76□□□□□ -2.13
GABPAQ06546 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.76□□□□□ -2.13
GABPAQ06546 MTND2P29-201ENST00000438595 412 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 DAP3P1-201ENST00000441522 278 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.76□□□□□ -2.13
GABPAQ06546 RNA5SP454-201ENST00000517231 127 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 SNORA31.24-201ENST00000517232 57 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 AF235103.2-201ENST00000525753 346 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 DEFB131C-201ENST00000528817 165 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.76□□□□□ -2.13
GABPAQ06546 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.76□□□□□ -2.13
GABPAQ06546 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 MIR4299-201ENST00000577899 72 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 MIR3169-201ENST00000578032 83 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 MIR4273-201ENST00000582824 84 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 AC018638.8-201ENST00000588755 281 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 AL359821.1-201ENST00000605519 182 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 AC137590.2-201ENST00000619709 240 ntBASIC1.76□□□□□ -2.13
GABPAQ06546 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
GABPAQ06546 AL356432.1-201ENST00000405809 419 ntBASIC1.75□□□□□ -2.13
GABPAQ06546 Y_RNA.619-201ENST00000410951 90 ntBASIC1.75□□□□□ -2.13
GABPAQ06546 RPS26P42-201ENST00000413485 326 ntBASIC1.75□□□□□ -2.13
GABPAQ06546 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.75□□□□□ -2.13
GABPAQ06546 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.75□□□□□ -2.13
GABPAQ06546 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.75□□□□□ -2.13
GABPAQ06546 FO393415.2-201ENST00000480085 343 ntBASIC1.75□□□□□ -2.13
GABPAQ06546 AC069439.1-201ENST00000494739 167 ntBASIC1.75□□□□□ -2.13
GABPAQ06546 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.75□□□□□ -2.13
GABPAQ06546 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.75□□□□□ -2.13
GABPAQ06546 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.75□□□□□ -2.13
GABPAQ06546 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.75□□□□□ -2.13
GABPAQ06546 RMST_6.1-201ENST00000611980 203 ntBASIC1.75□□□□□ -2.13
GABPAQ06546 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.75□□□□□ -2.13
GABPAQ06546 TCL6_2.1-201ENST00000615162 119 ntBASIC1.75□□□□□ -2.13
GABPAQ06546 MIR6128-201ENST00000615528 109 ntBASIC1.75□□□□□ -2.13
GABPAQ06546 AC009248.2-201ENST00000619826 254 ntBASIC1.75□□□□□ -2.13
GABPAQ06546 Y_RNA.301-201ENST00000364990 103 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 MIR32-201ENST00000384965 70 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 MIR487A-201ENST00000385009 80 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 RNU6-510P-201ENST00000391239 108 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 Z82188.1-201ENST00000436709 154 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 AC079354.2-201ENST00000453523 154 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 MTCO3P8-201ENST00000453691 755 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 AC082651.2-201ENST00000496833 166 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.74□□□□□ -2.13
GABPAQ06546 RNU1-54P-201ENST00000517181 120 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 MTND4LP26-201ENST00000518144 282 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 AC026470.2-201ENST00000561492 181 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.74□□□□□ -2.13
GABPAQ06546 SNRPGP20-201ENST00000604477 205 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 AC084782.3-201ENST00000612282 578 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.74□□□□□ -2.13
GABPAQ06546 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 MTND5P9-201ENST00000503854 1755 ntBASIC1.74□□□□□ -2.13
GABPAQ06546 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
GABPAQ06546 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.73□□□□□ -2.13
GABPAQ06546 RNU4-9P-201ENST00000364951 139 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.73□□□□□ -2.13
GABPAQ06546 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 AC244636.1-201ENST00000421152 228 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 EIF4EP2-201ENST00000422816 654 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 AL354695.1-201ENST00000427935 228 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 MTATP6P13-201ENST00000438531 667 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms