Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 Y_RNA.6-201ENST00000362350 114 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 Y_RNA.295-201ENST00000364918 102 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.56□□□□□ -2.16
CSTF1Q05048 RNU6-439P-201ENST00000384188 106 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 SNORA12.2-201ENST00000391040 156 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 RNU6-332P-201ENST00000391193 108 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CSTF1Q05048 RPL21P111-201ENST00000418453 477 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.56□□□□□ -2.16
CSTF1Q05048 RNU1-98P-201ENST00000458992 160 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 HMGN2P26-201ENST00000463169 339 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.56□□□□□ -2.16
CSTF1Q05048 RPS23P5-201ENST00000495419 428 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 AC025465.4-201ENST00000513422 638 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 RNU6-970P-201ENST00000516312 107 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.56□□□□□ -2.16
CSTF1Q05048 AP003465.2-201ENST00000602571 373 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.56□□□□□ -2.16
CSTF1Q05048 AC092807.2-201ENST00000609367 243 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 AC122108.2-201ENST00000611946 526 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 AC083806.3-201ENST00000614016 455 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 FAM157A-202ENST00000615155 405 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
CSTF1Q05048 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CSTF1Q05048 RNU6-227P-201ENST00000362865 103 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 RNU6-1252P-201ENST00000363054 104 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 Y_RNA.123-201ENST00000363338 102 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 Y_RNA.231-201ENST00000364358 102 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 Y_RNA.248-201ENST00000364501 109 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 SNORA18.2-201ENST00000383865 132 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 Y_RNA.402-201ENST00000383972 102 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 MIR934-201ENST00000401241 83 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 MIR1323-201ENST00000408090 73 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 RNA5SP100-201ENST00000410903 110 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 RNA5SP59-201ENST00000410922 110 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 FCF1P9-201ENST00000412546 282 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 MTND3P21-201ENST00000433774 331 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.55□□□□□ -2.16
CSTF1Q05048 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 AMD1P1-201ENST00000457220 922 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 U8.21-201ENST00000459536 136 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 RNU6-1208P-201ENST00000459588 107 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.55□□□□□ -2.16
CSTF1Q05048 RNU6-1332P-201ENST00000516666 104 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 SUMO2P18-201ENST00000518873 252 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.55□□□□□ -2.16
CSTF1Q05048 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.55□□□□□ -2.16
CSTF1Q05048 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.55□□□□□ -2.16
CSTF1Q05048 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.55□□□□□ -2.16
CSTF1Q05048 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 U4.5-201ENST00000617137 123 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 AC073534.2-201ENST00000620377 381 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.55□□□□□ -2.16
CSTF1Q05048 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
CSTF1Q05048 Y_RNA.132-201ENST00000363421 102 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 MIR521-1-201ENST00000384902 87 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 MIR549A-201ENST00000385268 96 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 SNORA26.3-201ENST00000391119 136 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.54□□□□□ -2.16
CSTF1Q05048 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.54□□□□□ -2.16
CSTF1Q05048 RBMX2P4-201ENST00000441256 376 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.54□□□□□ -2.16
CSTF1Q05048 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.54□□□□□ -2.16
CSTF1Q05048 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.54□□□□□ -2.16
CSTF1Q05048 SNORA31.17-201ENST00000516953 127 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.54□□□□□ -2.16
CSTF1Q05048 AC109635.3-201ENST00000529536 185 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.54□□□□□ -2.16
CSTF1Q05048 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.54□□□□□ -2.16
CSTF1Q05048 MIR5692C1-201ENST00000585309 91 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 AL162413.1-201ENST00000603198 110 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 AC092794.1-201ENST00000612734 582 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 AC103705.1-201ENST00000619013 241 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 MIR3662-201ENST00000637030 95 ntBASIC1.54□□□□□ -2.16
CSTF1Q05048 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.54□□□□□ -2.16
CSTF1Q05048 AL159152.1-201ENST00000635019 2587 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 Y_RNA.9-201ENST00000362354 101 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 RNU6-545P-201ENST00000362681 104 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 RNU4-13P-201ENST00000364019 141 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 RNU6-53P-201ENST00000365367 106 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CSTF1Q05048 RNU6-877P-201ENST00000383868 107 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CSTF1Q05048 RNA5SP494-201ENST00000410653 129 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 EIF1P1-201ENST00000421436 341 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 USP9YP28-201ENST00000435142 589 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CSTF1Q05048 FGF7P6-202ENST00000451282 293 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 AC027575.1-201ENST00000481064 460 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 AC010409.1-201ENST00000487382 476 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 MTCO2P30-201ENST00000503662 364 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 AC096745.1-201ENST00000509945 370 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 RNU6-1069P-201ENST00000516612 133 ntBASIC1.53□□□□□ -2.16
CSTF1Q05048 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.53□□□□□ -2.16
CSTF1Q05048 MIR3942-201ENST00000585264 109 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms