Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.52□□□□□ -2.33
CACNA1BQ00975 RNU4-77P-201ENST00000516692 156 ntBASIC0.52□□□□□ -2.33
CACNA1BQ00975 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.52□□□□□ -2.33
CACNA1BQ00975 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.52□□□□□ -2.33
CACNA1BQ00975 AL512310.8-201ENST00000550183 120 ntBASIC0.52□□□□□ -2.33
CACNA1BQ00975 NIFKP6-201ENST00000598115 845 ntBASIC0.52□□□□□ -2.33
CACNA1BQ00975 RPL17P51-201ENST00000605218 238 ntBASIC0.52□□□□□ -2.33
CACNA1BQ00975 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.52□□□□□ -2.33
CACNA1BQ00975 AC008250.2-201ENST00000615261 205 ntBASIC0.52□□□□□ -2.33
CACNA1BQ00975 SEPT14P19-203ENST00000633205 211 ntBASIC0.52□□□□□ -2.33
CACNA1BQ00975 AL450472.1-202ENST00000637286 180 ntBASIC0.52□□□□□ -2.33
CACNA1BQ00975 MTND4P14-201ENST00000435799 1354 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CACNA1BQ00975 Y_RNA.367-201ENST00000365544 101 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 RNU6-378P-201ENST00000384324 107 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 MIR1-2-201ENST00000384961 85 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 RPS29P13-201ENST00000402041 169 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 RNA5SP201-201ENST00000410316 124 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.51□□□□□ -2.33
CACNA1BQ00975 AL133396.1-201ENST00000432048 687 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 GTF2IP13-201ENST00000438487 386 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.51□□□□□ -2.33
CACNA1BQ00975 RPS29P15-201ENST00000458329 171 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.51□□□□□ -2.33
CACNA1BQ00975 AC145146.1-201ENST00000496370 254 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 AC016632.1-201ENST00000503994 196 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 SNORD116-28-201ENST00000516123 91 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 RNU6-1098P-201ENST00000516772 96 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 RNU6-1220P-201ENST00000517126 108 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.51□□□□□ -2.33
CACNA1BQ00975 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.51□□□□□ -2.33
CACNA1BQ00975 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.51□□□□□ -2.33
CACNA1BQ00975 AC090115.3-201ENST00000553218 849 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 AP003465.2-201ENST00000602571 373 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 AC245014.2-201ENST00000603689 287 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 AP000811.1-201ENST00000603803 651 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 Z84480.1-201ENST00000605131 311 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 AC246785.4-201ENST00000605374 287 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 MTND4P4-201ENST00000439033 1366 ntBASIC0.51□□□□□ -2.33
CACNA1BQ00975 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.51□□□□□ -2.33
CACNA1BQ00975 RNU1-124P-201ENST00000363861 145 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 RNU6-169P-201ENST00000365336 107 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 RNU6-827P-201ENST00000365553 106 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 RPS3AP3-201ENST00000411933 242 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1BQ00975 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1BQ00975 HMGN2P34-201ENST00000437647 269 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 DYNLT3P2-201ENST00000442517 295 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 SNORD57-201ENST00000448188 72 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 HMGN2P9-201ENST00000476875 229 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 AC069113.1-201ENST00000517763 267 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 SUMO2P18-201ENST00000518873 252 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 RAB11AP2-201ENST00000545905 639 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 AC019288.1-201ENST00000557918 224 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1BQ00975 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1BQ00975 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.5□□□□□ -2.33
CACNA1BQ00975 MIR5006-201ENST00000583027 110 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 CTHRC1P1-201ENST00000605383 469 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 AC006566.1-201ENST00000608943 513 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 BX322639.1-202ENST00000423987 2213 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
CACNA1BQ00975 RNU6-1287P-201ENST00000362914 107 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 RNU6-1097P-201ENST00000363586 107 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 SNORA63D-201ENST00000364359 132 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 RNU6-715P-201ENST00000365204 103 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 SNORA25-201ENST00000384384 134 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 RNU6-1060P-201ENST00000384664 107 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1BQ00975 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.5□□□□□ -2.33
CACNA1BQ00975 SNX2P2-201ENST00000424553 323 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1BQ00975 AC002486.1-201ENST00000435098 391 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 AC104850.1-201ENST00000435940 476 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 AC008628.2-201ENST00000502605 298 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 RNU7-40P-201ENST00000516397 64 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 SNORA18.6-201ENST00000516792 115 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 MTND2P32-201ENST00000521584 1038 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1BQ00975 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.5□□□□□ -2.33
CACNA1BQ00975 SNORA59B-202ENST00000578183 701 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 AP001836.1-201ENST00000604675 523 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 AC002044.1-201ENST00000606707 158 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 AC009994.1-201ENST00000606889 253 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.5□□□□□ -2.33
CACNA1BQ00975 PCGEM1.1-201ENST00000613431 131 ntBASIC0.5□□□□□ -2.33
CACNA1BQ00975 RNU6-336P-201ENST00000364891 107 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 RNU6-692P-201ENST00000384496 107 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 MIR146A-201ENST00000385201 99 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 MIR618-201ENST00000385287 98 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 MRPL35P1-201ENST00000404272 572 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 RPL37P10-201ENST00000412884 288 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.49□□□□□ -2.33
CACNA1BQ00975 HSPE1P9-201ENST00000440046 311 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 RPS29P8-201ENST00000445109 171 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 USP9YP12-201ENST00000450481 570 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.49□□□□□ -2.33
CACNA1BQ00975 RAP1BP2-201ENST00000478270 544 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 AC079382.1-201ENST00000493346 557 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms