Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC006001.4-201ENST00000622243 395 ntBASIC1.29□□□□□ -2.2
CBX1P83916 SCARNA4-201ENST00000629045 128 ntBASIC1.29□□□□□ -2.2
CBX1P83916 ZNF72P-201ENST00000425869 1908 ntBASIC1.28□□□□□ -2.2
CBX1P83916 AP000568.1-201ENST00000282964 442 ntBASIC1.28□□□□□ -2.2
CBX1P83916 RNU6-1085P-201ENST00000363576 107 ntBASIC1.28□□□□□ -2.2
CBX1P83916 SNORA4.2-201ENST00000365313 147 ntBASIC1.28□□□□□ -2.2
CBX1P83916 RNU6-1065P-201ENST00000384513 106 ntBASIC1.28□□□□□ -2.2
CBX1P83916 MIR194-1-201ENST00000384892 85 ntBASIC1.28□□□□□ -2.2
CBX1P83916 RNU6-648P-201ENST00000410190 107 ntBASIC1.28□□□□□ -2.2
CBX1P83916 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.28□□□□□ -2.2
CBX1P83916 USP9YP14-201ENST00000430663 563 ntBASIC1.28□□□□□ -2.2
CBX1P83916 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.28□□□□□ -2.2
CBX1P83916 AC026407.1-201ENST00000518369 204 ntBASIC1.28□□□□□ -2.2
CBX1P83916 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.28□□□□□ -2.2
CBX1P83916 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.28□□□□□ -2.2
CBX1P83916 MIR4709-201ENST00000577272 72 ntBASIC1.28□□□□□ -2.2
CBX1P83916 AL353997.5-201ENST00000618886 171 ntBASIC1.28□□□□□ -2.2
CBX1P83916 AL158209.2-201ENST00000619266 216 ntBASIC1.28□□□□□ -2.2
CBX1P83916 AC073534.2-201ENST00000620377 381 ntBASIC1.28□□□□□ -2.2
CBX1P83916 AC097520.1-201ENST00000624435 385 ntBASIC1.28□□□□□ -2.2
CBX1P83916 MTND5P26-201ENST00000426018 1752 ntBASIC1.28□□□□□ -2.2
CBX1P83916 AC121333.1-201ENST00000567488 2709 ntBASIC1.28□□□□□ -2.2
CBX1P83916 SNORA33-201ENST00000363664 130 ntBASIC1.27□□□□□ -2.21
CBX1P83916 RNU4-13P-201ENST00000364019 141 ntBASIC1.27□□□□□ -2.21
CBX1P83916 SNORA22-201ENST00000383907 134 ntBASIC1.27□□□□□ -2.21
CBX1P83916 SNORA22C-201ENST00000384614 134 ntBASIC1.27□□□□□ -2.21
CBX1P83916 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CBX1P83916 MIR1253-201ENST00000408273 105 ntBASIC1.27□□□□□ -2.21
CBX1P83916 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.27□□□□□ -2.21
CBX1P83916 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.27□□□□□ -2.21
CBX1P83916 EIF1P1-201ENST00000421436 341 ntBASIC1.27□□□□□ -2.21
CBX1P83916 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.27□□□□□ -2.21
CBX1P83916 MTATP6P17-201ENST00000431030 672 ntBASIC1.27□□□□□ -2.21
CBX1P83916 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.27□□□□□ -2.21
CBX1P83916 RNU7-57P-201ENST00000459540 60 ntBASIC1.27□□□□□ -2.21
CBX1P83916 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.27□□□□□ -2.21
CBX1P83916 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.27□□□□□ -2.21
CBX1P83916 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.27□□□□□ -2.21
CBX1P83916 AC026371.1-201ENST00000551867 419 ntBASIC1.27□□□□□ -2.21
CBX1P83916 AL158211.1-201ENST00000566763 763 ntBASIC1.27□□□□□ -2.21
CBX1P83916 MTND1P15-201ENST00000579262 949 ntBASIC1.27□□□□□ -2.21
CBX1P83916 AC004492.1-201ENST00000607036 742 ntBASIC1.27□□□□□ -2.21
CBX1P83916 FAM157A-202ENST00000615155 405 ntBASIC1.27□□□□□ -2.21
CBX1P83916 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
CBX1P83916 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
CBX1P83916 Y_RNA.140-201ENST00000363474 103 ntBASIC1.26□□□□□ -2.21
CBX1P83916 Y_RNA.231-201ENST00000364358 102 ntBASIC1.26□□□□□ -2.21
CBX1P83916 RNU6-534P-201ENST00000364877 106 ntBASIC1.26□□□□□ -2.21
CBX1P83916 RNU6-417P-201ENST00000384712 107 ntBASIC1.26□□□□□ -2.21
CBX1P83916 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CBX1P83916 MIR450B-201ENST00000401182 78 ntBASIC1.26□□□□□ -2.21
CBX1P83916 RNU6-57P-201ENST00000411348 103 ntBASIC1.26□□□□□ -2.21
CBX1P83916 AC004965.1-201ENST00000413033 213 ntBASIC1.26□□□□□ -2.21
CBX1P83916 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.26□□□□□ -2.21
CBX1P83916 RNU7-34P-201ENST00000459394 64 ntBASIC1.26□□□□□ -2.21
CBX1P83916 RPS26P45-201ENST00000471748 340 ntBASIC1.26□□□□□ -2.21
CBX1P83916 RPL30P7-201ENST00000479312 323 ntBASIC1.26□□□□□ -2.21
CBX1P83916 RPL23AP75-201ENST00000491601 451 ntBASIC1.26□□□□□ -2.21
CBX1P83916 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.26□□□□□ -2.21
CBX1P83916 MTCYBP18-201ENST00000501056 747 ntBASIC1.26□□□□□ -2.21
CBX1P83916 Y_RNA.688-201ENST00000516565 95 ntBASIC1.26□□□□□ -2.21
CBX1P83916 RNU6-405P-201ENST00000516637 110 ntBASIC1.26□□□□□ -2.21
CBX1P83916 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.26□□□□□ -2.21
CBX1P83916 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.26□□□□□ -2.21
CBX1P83916 DNAJC19P9-201ENST00000555084 351 ntBASIC1.26□□□□□ -2.21
CBX1P83916 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.26□□□□□ -2.21
CBX1P83916 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.26□□□□□ -2.21
CBX1P83916 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.26□□□□□ -2.21
CBX1P83916 AL078596.1-201ENST00000624856 447 ntBASIC1.26□□□□□ -2.21
CBX1P83916 ZNF204P-201ENST00000416749 2397 ntBASIC1.26□□□□□ -2.21
CBX1P83916 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CBX1P83916 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.25□□□□□ -2.21
CBX1P83916 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CBX1P83916 SNORD116-9-201ENST00000384000 95 ntBASIC1.25□□□□□ -2.21
CBX1P83916 SNORD116-3-201ENST00000384287 95 ntBASIC1.25□□□□□ -2.21
CBX1P83916 SNORD116-7-201ENST00000384404 95 ntBASIC1.25□□□□□ -2.21
CBX1P83916 SNORD116-5-201ENST00000384462 95 ntBASIC1.25□□□□□ -2.21
CBX1P83916 MTCO3P40-201ENST00000392516 676 ntBASIC1.25□□□□□ -2.21
CBX1P83916 CYCSP49-201ENST00000420810 319 ntBASIC1.25□□□□□ -2.21
CBX1P83916 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.25□□□□□ -2.21
CBX1P83916 MTCO1P20-201ENST00000425366 358 ntBASIC1.25□□□□□ -2.21
CBX1P83916 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.25□□□□□ -2.21
CBX1P83916 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.25□□□□□ -2.21
CBX1P83916 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.25□□□□□ -2.21
CBX1P83916 AC083904.1-201ENST00000487828 231 ntBASIC1.25□□□□□ -2.21
CBX1P83916 HMGN1P12-201ENST00000499125 195 ntBASIC1.25□□□□□ -2.21
CBX1P83916 AC024995.1-201ENST00000523014 93 ntBASIC1.25□□□□□ -2.21
CBX1P83916 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.25□□□□□ -2.21
CBX1P83916 AL133215.3-201ENST00000609801 448 ntBASIC1.25□□□□□ -2.21
CBX1P83916 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.25□□□□□ -2.21
CBX1P83916 AC008873.1-201ENST00000625051 138 ntBASIC1.25□□□□□ -2.21
CBX1P83916 RNU6-522P-201ENST00000364497 107 ntBASIC1.24□□□□□ -2.21
CBX1P83916 Y_RNA.287-201ENST00000364853 94 ntBASIC1.24□□□□□ -2.21
CBX1P83916 RNU6-259P-201ENST00000383999 107 ntBASIC1.24□□□□□ -2.21
CBX1P83916 RNA5SP323-201ENST00000391094 133 ntBASIC1.24□□□□□ -2.21
CBX1P83916 SNX2P2-201ENST00000424553 323 ntBASIC1.24□□□□□ -2.21
CBX1P83916 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.24□□□□□ -2.21
CBX1P83916 RNU6-344P-201ENST00000516635 111 ntBASIC1.24□□□□□ -2.21
CBX1P83916 AC016957.1-201ENST00000534895 309 ntBASIC1.24□□□□□ -2.21
CBX1P83916 RAB11AP2-201ENST00000545905 639 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms