Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 Y_RNA.399-201ENST00000383955 105 ntBASIC0.67□□□□□ -2.3
TNNC1P63316 MIR1-2-201ENST00000384961 85 ntBASIC0.67□□□□□ -2.3
TNNC1P63316 MIR586-201ENST00000385035 97 ntBASIC0.67□□□□□ -2.3
TNNC1P63316 AF228730.1-201ENST00000397972 663 ntBASIC0.67□□□□□ -2.3
TNNC1P63316 RPS3AP3-201ENST00000411933 242 ntBASIC0.67□□□□□ -2.3
TNNC1P63316 RPS3AP1-201ENST00000413190 320 ntBASIC0.67□□□□□ -2.3
TNNC1P63316 MTND3P17-201ENST00000416968 344 ntBASIC0.67□□□□□ -2.3
TNNC1P63316 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.67□□□□□ -2.3
TNNC1P63316 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.67□□□□□ -2.3
TNNC1P63316 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.67□□□□□ -2.3
TNNC1P63316 AC074290.1-201ENST00000448883 135 ntBASIC0.67□□□□□ -2.3
TNNC1P63316 MTND2P14-201ENST00000482139 351 ntBASIC0.67□□□□□ -2.3
TNNC1P63316 RNU1-142P-201ENST00000516682 145 ntBASIC0.67□□□□□ -2.3
TNNC1P63316 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TNNC1P63316 AL022161.1-201ENST00000604390 213 ntBASIC0.67□□□□□ -2.3
TNNC1P63316 MIR8054-201ENST00000620877 86 ntBASIC0.67□□□□□ -2.3
TNNC1P63316 SNORD3E-202ENST00000627253 216 ntBASIC0.67□□□□□ -2.3
TNNC1P63316 RNU4-48P-201ENST00000365559 182 ntBASIC0.66□□□□□ -2.3
TNNC1P63316 RNU6-42P-201ENST00000384165 107 ntBASIC0.66□□□□□ -2.3
TNNC1P63316 SNORA80D-201ENST00000384488 135 ntBASIC0.66□□□□□ -2.3
TNNC1P63316 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.66□□□□□ -2.3
TNNC1P63316 NDUFA5P4-201ENST00000436704 385 ntBASIC0.66□□□□□ -2.3
TNNC1P63316 MTCO2P3-201ENST00000442543 421 ntBASIC0.66□□□□□ -2.3
TNNC1P63316 SCARNA18-201ENST00000459004 134 ntBASIC0.66□□□□□ -2.3
TNNC1P63316 AC146944.4-201ENST00000602697 718 ntBASIC0.66□□□□□ -2.3
TNNC1P63316 Y_RNA.122-201ENST00000363331 96 ntBASIC0.65□□□□□ -2.31
TNNC1P63316 RNY4P34-201ENST00000364779 95 ntBASIC0.65□□□□□ -2.31
TNNC1P63316 RNU6-969P-201ENST00000383900 105 ntBASIC0.65□□□□□ -2.31
TNNC1P63316 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.31
TNNC1P63316 MIR653-201ENST00000385279 96 ntBASIC0.65□□□□□ -2.31
TNNC1P63316 AC016909.1-201ENST00000415916 166 ntBASIC0.65□□□□□ -2.31
TNNC1P63316 AC009961.2-201ENST00000435771 251 ntBASIC0.65□□□□□ -2.31
TNNC1P63316 MTCO3P18-201ENST00000440206 761 ntBASIC0.65□□□□□ -2.31
TNNC1P63316 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.65□□□□□ -2.31
TNNC1P63316 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.65□□□□□ -2.31
TNNC1P63316 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.65□□□□□ -2.31
TNNC1P63316 AC016957.1-201ENST00000534895 309 ntBASIC0.65□□□□□ -2.31
TNNC1P63316 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.65□□□□□ -2.31
TNNC1P63316 AC068790.6-201ENST00000602558 258 ntBASIC0.65□□□□□ -2.31
TNNC1P63316 AC006566.1-201ENST00000608943 513 ntBASIC0.65□□□□□ -2.31
TNNC1P63316 AL359075.3-201ENST00000613288 217 ntBASIC0.65□□□□□ -2.31
TNNC1P63316 RMST_2.1-201ENST00000617263 136 ntBASIC0.65□□□□□ -2.31
TNNC1P63316 AC106754.1-201ENST00000562632 1513 ntBASIC0.64□□□□□ -2.31
TNNC1P63316 AC004866.1-201ENST00000411748 78 ntBASIC0.64□□□□□ -2.31
TNNC1P63316 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.64□□□□□ -2.31
TNNC1P63316 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.64□□□□□ -2.31
TNNC1P63316 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.64□□□□□ -2.31
TNNC1P63316 RNU7-57P-201ENST00000459540 60 ntBASIC0.64□□□□□ -2.31
TNNC1P63316 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.64□□□□□ -2.31
TNNC1P63316 MTATP6P9-201ENST00000515039 680 ntBASIC0.64□□□□□ -2.31
TNNC1P63316 RNU6-323P-201ENST00000521915 107 ntBASIC0.64□□□□□ -2.31
TNNC1P63316 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.64□□□□□ -2.31
TNNC1P63316 AC068790.2-201ENST00000602601 557 ntBASIC0.64□□□□□ -2.31
TNNC1P63316 AL603839.4-201ENST00000624658 1005 ntBASIC0.64□□□□□ -2.31
TNNC1P63316 MTND4P4-201ENST00000439033 1366 ntBASIC0.64□□□□□ -2.31
TNNC1P63316 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
TNNC1P63316 RNU5B-2P-201ENST00000363036 113 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 RNU4-76P-201ENST00000364509 141 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 MIR660-201ENST00000385235 97 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 SNORA12.1-201ENST00000390873 148 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 RNU6-440P-201ENST00000390882 105 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 RNU6-57P-201ENST00000411348 103 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.63□□□□□ -2.31
TNNC1P63316 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.63□□□□□ -2.31
TNNC1P63316 MTCO3P8-201ENST00000453691 755 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 RNU7-167P-201ENST00000459160 62 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 RPS26P48-201ENST00000491713 339 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.63□□□□□ -2.31
TNNC1P63316 RNA5SP255-201ENST00000516370 107 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.63□□□□□ -2.31
TNNC1P63316 AC004584.2-201ENST00000570407 410 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 BNIP3P39-201ENST00000601077 554 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 RNU6-85P-201ENST00000605989 107 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 AL391834.2-201ENST00000609982 546 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 AC106754.2-201ENST00000623006 233 ntBASIC0.63□□□□□ -2.31
TNNC1P63316 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
TNNC1P63316 RNA5SP361-201ENST00000362686 118 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 RNU6-1305P-201ENST00000364353 104 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 MIR605-201ENST00000385078 83 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 SNORD41-201ENST00000386967 70 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 MIR942-201ENST00000401111 86 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 AL034345.1-201ENST00000407768 123 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.62□□□□□ -2.31
TNNC1P63316 RPS26P5-201ENST00000418544 335 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 Z99497.1-201ENST00000421282 135 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.62□□□□□ -2.31
TNNC1P63316 AC007215.1-201ENST00000464893 276 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 HMGB1P29-201ENST00000505659 499 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.62□□□□□ -2.31
TNNC1P63316 AC010493.1-201ENST00000513479 292 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 AC025647.1-201ENST00000517879 253 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.62□□□□□ -2.31
TNNC1P63316 APOOP3-201ENST00000536787 586 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 AP000907.4-201ENST00000604143 237 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 AC097065.2-201ENST00000608159 533 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 AP001596.2-201ENST00000608410 312 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 AC073349.3-201ENST00000617616 186 ntBASIC0.62□□□□□ -2.31
TNNC1P63316 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
TNNC1P63316 MTND4P5-201ENST00000435821 1374 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 253.3 ms