Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.65□□□□□ -2.15
RPS4XP62701 MIR1283-1-201ENST00000408494 87 ntBASIC1.65□□□□□ -2.15
RPS4XP62701 CYCSP49-201ENST00000420810 319 ntBASIC1.65□□□□□ -2.15
RPS4XP62701 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RPS4XP62701 MTCO3P8-201ENST00000453691 755 ntBASIC1.65□□□□□ -2.15
RPS4XP62701 RNU6-329P-201ENST00000459618 107 ntBASIC1.65□□□□□ -2.15
RPS4XP62701 AC067942.3-201ENST00000512025 362 ntBASIC1.65□□□□□ -2.15
RPS4XP62701 RNU4-49P-201ENST00000516080 140 ntBASIC1.65□□□□□ -2.15
RPS4XP62701 RNVU1-2-201ENST00000516326 135 ntBASIC1.65□□□□□ -2.15
RPS4XP62701 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.65□□□□□ -2.15
RPS4XP62701 RNA5SP54-201ENST00000516951 92 ntBASIC1.65□□□□□ -2.15
RPS4XP62701 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.65□□□□□ -2.15
RPS4XP62701 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.65□□□□□ -2.15
RPS4XP62701 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.65□□□□□ -2.15
RPS4XP62701 SNORA59B-202ENST00000578183 701 ntBASIC1.65□□□□□ -2.15
RPS4XP62701 AC010928.2-201ENST00000588017 287 ntBASIC1.65□□□□□ -2.15
RPS4XP62701 AC010900.2-201ENST00000604508 210 ntBASIC1.65□□□□□ -2.15
RPS4XP62701 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.65□□□□□ -2.15
RPS4XP62701 Y_RNA.86-201ENST00000363020 111 ntBASIC1.64□□□□□ -2.15
RPS4XP62701 MIR676-201ENST00000390702 67 ntBASIC1.64□□□□□ -2.15
RPS4XP62701 MIR320B2-201ENST00000408479 138 ntBASIC1.64□□□□□ -2.15
RPS4XP62701 MTCO3P46-201ENST00000425787 232 ntBASIC1.64□□□□□ -2.15
RPS4XP62701 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
RPS4XP62701 AC069439.1-201ENST00000494739 167 ntBASIC1.64□□□□□ -2.15
RPS4XP62701 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.64□□□□□ -2.15
RPS4XP62701 RNU6-358P-201ENST00000516564 75 ntBASIC1.64□□□□□ -2.15
RPS4XP62701 RNU6-1198P-201ENST00000516904 67 ntBASIC1.64□□□□□ -2.15
RPS4XP62701 RNU6-273P-201ENST00000516937 96 ntBASIC1.64□□□□□ -2.15
RPS4XP62701 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.64□□□□□ -2.15
RPS4XP62701 MIR4713-201ENST00000582691 75 ntBASIC1.64□□□□□ -2.15
RPS4XP62701 AC005296.1-201ENST00000616145 209 ntBASIC1.64□□□□□ -2.15
RPS4XP62701 AC009248.2-201ENST00000619826 254 ntBASIC1.64□□□□□ -2.15
RPS4XP62701 AC091932.3-201ENST00000624223 323 ntBASIC1.64□□□□□ -2.15
RPS4XP62701 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.64□□□□□ -2.15
RPS4XP62701 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RPS4XP62701 RNU6-137P-201ENST00000363680 108 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS4XP62701 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RPS4XP62701 AL356432.1-201ENST00000405809 419 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 RNU6-174P-201ENST00000410406 106 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 RNA5SP100-201ENST00000410903 110 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 RNA5SP59-201ENST00000410922 110 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 AC004866.1-201ENST00000411748 78 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.63□□□□□ -2.15
RPS4XP62701 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS4XP62701 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.63□□□□□ -2.15
RPS4XP62701 Z82188.1-201ENST00000436709 154 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 MTATP6P13-201ENST00000438531 667 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS4XP62701 snoU13.30-201ENST00000458951 104 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 RPS29P11-201ENST00000496507 171 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 RNU2-34P-201ENST00000516534 121 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.63□□□□□ -2.15
RPS4XP62701 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.63□□□□□ -2.15
RPS4XP62701 RRN3P3-201ENST00000549207 578 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 SUB1P4-201ENST00000566062 339 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 AC060780.3-201ENST00000589464 80 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.63□□□□□ -2.15
RPS4XP62701 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.63□□□□□ -2.15
RPS4XP62701 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.63□□□□□ -2.15
RPS4XP62701 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 RNU6-245P-201ENST00000384020 107 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 RNU6-306P-201ENST00000384617 107 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 MIR32-201ENST00000384965 70 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 MIR549A-201ENST00000385268 96 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 AC243428.1-201ENST00000421099 264 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 AL139396.1-201ENST00000421137 167 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.62□□□□□ -2.15
RPS4XP62701 NFU1P2-201ENST00000448700 469 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 SNORD5.1-201ENST00000458800 75 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.62□□□□□ -2.15
RPS4XP62701 SNORA25.15-201ENST00000516487 89 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 RNU6-856P-201ENST00000516959 98 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 RNU1-54P-201ENST00000517181 120 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 SUMO2P18-201ENST00000518873 252 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.62□□□□□ -2.15
RPS4XP62701 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.62□□□□□ -2.15
RPS4XP62701 MIR4419B-201ENST00000577260 68 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 AC024614.2-201ENST00000577584 372 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 MIR4753-201ENST00000585119 83 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 AC092794.1-201ENST00000612734 582 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 AL159152.1-201ENST00000635019 2587 ntBASIC1.62□□□□□ -2.15
RPS4XP62701 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RPS4XP62701 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
RPS4XP62701 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
RPS4XP62701 ZNF204P-201ENST00000416749 2397 ntBASIC1.61□□□□□ -2.15
RPS4XP62701 RNU6-975P-201ENST00000384296 105 ntBASIC1.61□□□□□ -2.15
RPS4XP62701 MIR487A-201ENST00000385009 80 ntBASIC1.61□□□□□ -2.15
RPS4XP62701 MIR586-201ENST00000385035 97 ntBASIC1.61□□□□□ -2.15
RPS4XP62701 MIR153-2-201ENST00000385225 87 ntBASIC1.61□□□□□ -2.15
RPS4XP62701 RNA5SP213-201ENST00000391031 106 ntBASIC1.61□□□□□ -2.15
RPS4XP62701 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.61□□□□□ -2.15
RPS4XP62701 Y_RNA.599-201ENST00000410489 109 ntBASIC1.61□□□□□ -2.15
RPS4XP62701 Y_RNA.619-201ENST00000410951 90 ntBASIC1.61□□□□□ -2.15
RPS4XP62701 MTND3P8-201ENST00000412909 339 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms