Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PART1_2.1-201ENST00000612397 250 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 AC006927.2-201ENST00000639256 389 ntBASIC-0.34□□□□□ -2.46
CKS1BP61024 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.34□□□□□ -2.46
CKS1BP61024 SNORD114-26-201ENST00000363543 72 ntBASIC-0.35□□□□□ -2.47
CKS1BP61024 SNORA40.2-201ENST00000390847 128 ntBASIC-0.35□□□□□ -2.47
CKS1BP61024 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.35□□□□□ -2.47
CKS1BP61024 AC004854.1-201ENST00000440356 349 ntBASIC-0.35□□□□□ -2.47
CKS1BP61024 AC074290.1-201ENST00000448883 135 ntBASIC-0.35□□□□□ -2.47
CKS1BP61024 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.35□□□□□ -2.47
CKS1BP61024 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.35□□□□□ -2.47
CKS1BP61024 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.35□□□□□ -2.47
CKS1BP61024 AC011712.1-201ENST00000588959 234 ntBASIC-0.35□□□□□ -2.47
CKS1BP61024 BNIP3P26-201ENST00000600827 554 ntBASIC-0.35□□□□□ -2.47
CKS1BP61024 AC104408.1-201ENST00000605241 170 ntBASIC-0.35□□□□□ -2.47
CKS1BP61024 AL139286.2-201ENST00000606838 396 ntBASIC-0.35□□□□□ -2.47
CKS1BP61024 AL450472.1-202ENST00000637286 180 ntBASIC-0.35□□□□□ -2.47
CKS1BP61024 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.36□□□□□ -2.47
CKS1BP61024 AC090960.1-201ENST00000421072 306 ntBASIC-0.36□□□□□ -2.47
CKS1BP61024 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.36□□□□□ -2.47
CKS1BP61024 RNU7-94P-201ENST00000459576 63 ntBASIC-0.36□□□□□ -2.47
CKS1BP61024 LRRC34P2-201ENST00000514850 553 ntBASIC-0.36□□□□□ -2.47
CKS1BP61024 RNU6-123P-201ENST00000516163 102 ntBASIC-0.36□□□□□ -2.47
CKS1BP61024 AC036111.3-201ENST00000526389 112 ntBASIC-0.36□□□□□ -2.47
CKS1BP61024 DEFB131C-201ENST00000528817 165 ntBASIC-0.36□□□□□ -2.47
CKS1BP61024 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.36□□□□□ -2.47
CKS1BP61024 AC112693.2-201ENST00000556538 232 ntBASIC-0.36□□□□□ -2.47
CKS1BP61024 BCRP9-201ENST00000605312 388 ntBASIC-0.36□□□□□ -2.47
CKS1BP61024 uc_338.34-201ENST00000617467 174 ntBASIC-0.36□□□□□ -2.47
CKS1BP61024 AL445523.1-201ENST00000451184 1362 ntBASIC-0.36□□□□□ -2.47
CKS1BP61024 AC073343.1-201ENST00000328239 651 ntBASIC-0.37□□□□□ -2.47
CKS1BP61024 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
CKS1BP61024 RNU6-716P-201ENST00000365621 103 ntBASIC-0.37□□□□□ -2.47
CKS1BP61024 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.37□□□□□ -2.47
CKS1BP61024 MIR1185-1-201ENST00000408598 86 ntBASIC-0.37□□□□□ -2.47
CKS1BP61024 AL663109.1-201ENST00000411498 844 ntBASIC-0.37□□□□□ -2.47
CKS1BP61024 AC106883.1-201ENST00000418805 562 ntBASIC-0.37□□□□□ -2.47
CKS1BP61024 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.37□□□□□ -2.47
CKS1BP61024 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.37□□□□□ -2.47
CKS1BP61024 AC005002.2-201ENST00000438228 269 ntBASIC-0.37□□□□□ -2.47
CKS1BP61024 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.37□□□□□ -2.47
CKS1BP61024 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.37□□□□□ -2.47
CKS1BP61024 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.37□□□□□ -2.47
CKS1BP61024 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.37□□□□□ -2.47
CKS1BP61024 SNORA40.12-201ENST00000516329 111 ntBASIC-0.37□□□□□ -2.47
CKS1BP61024 RNU7-51P-201ENST00000516560 62 ntBASIC-0.37□□□□□ -2.47
CKS1BP61024 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.37□□□□□ -2.47
CKS1BP61024 MIR4300-201ENST00000581016 96 ntBASIC-0.37□□□□□ -2.47
CKS1BP61024 AC091965.4-201ENST00000607691 587 ntBASIC-0.37□□□□□ -2.47
CKS1BP61024 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.37□□□□□ -2.47
CKS1BP61024 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.37□□□□□ -2.47
CKS1BP61024 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.37□□□□□ -2.47
CKS1BP61024 MIR1-1-201ENST00000362147 71 ntBASIC-0.38□□□□□ -2.47
CKS1BP61024 RNU6-336P-201ENST00000364891 107 ntBASIC-0.38□□□□□ -2.47
CKS1BP61024 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.38□□□□□ -2.47
CKS1BP61024 MIR1197-201ENST00000408818 88 ntBASIC-0.38□□□□□ -2.47
CKS1BP61024 RNU2-3P-201ENST00000410144 191 ntBASIC-0.38□□□□□ -2.47
CKS1BP61024 RPS3AP3-201ENST00000411933 242 ntBASIC-0.38□□□□□ -2.47
CKS1BP61024 MTATP6P16-201ENST00000434543 526 ntBASIC-0.38□□□□□ -2.47
CKS1BP61024 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.38□□□□□ -2.47
CKS1BP61024 AC010486.2-201ENST00000505572 483 ntBASIC-0.38□□□□□ -2.47
CKS1BP61024 MTCO3P27-201ENST00000514397 196 ntBASIC-0.38□□□□□ -2.47
CKS1BP61024 AC109479.2-201ENST00000517842 174 ntBASIC-0.38□□□□□ -2.47
CKS1BP61024 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.38□□□□□ -2.47
CKS1BP61024 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
CKS1BP61024 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.38□□□□□ -2.47
CKS1BP61024 AL158042.1-201ENST00000605338 460 ntBASIC-0.38□□□□□ -2.47
CKS1BP61024 SNORD114-5-201ENST00000362928 70 ntBASIC-0.39□□□□□ -2.47
CKS1BP61024 MIR644A-201ENST00000385262 94 ntBASIC-0.39□□□□□ -2.47
CKS1BP61024 RNU6-607P-201ENST00000411283 108 ntBASIC-0.39□□□□□ -2.47
CKS1BP61024 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.39□□□□□ -2.47
CKS1BP61024 AC104136.1-201ENST00000512969 394 ntBASIC-0.39□□□□□ -2.47
CKS1BP61024 AC068587.4-201ENST00000533893 186 ntBASIC-0.39□□□□□ -2.47
CKS1BP61024 7SK.7-201ENST00000603504 247 ntBASIC-0.39□□□□□ -2.47
CKS1BP61024 AP002360.4-201ENST00000606980 481 ntBASIC-0.39□□□□□ -2.47
CKS1BP61024 AC108747.1-201ENST00000609508 535 ntBASIC-0.39□□□□□ -2.47
CKS1BP61024 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.39□□□□□ -2.47
CKS1BP61024 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.39□□□□□ -2.47
CKS1BP61024 RNY4P24-201ENST00000362735 96 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 RNA5SP517-201ENST00000364724 117 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 AC016909.1-201ENST00000415916 166 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 AC008134.1-201ENST00000420943 193 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 CALM2P4-201ENST00000430810 426 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.4□□□□□ -2.47
CKS1BP61024 SNAP23P1-201ENST00000433229 246 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 SEPT7P4-201ENST00000437076 306 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.4□□□□□ -2.47
CKS1BP61024 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 AC117522.1-201ENST00000509821 380 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 AC079395.1-201ENST00000510981 262 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 RNU6-334P-201ENST00000517072 102 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 RNU7-128P-201ENST00000517247 62 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.4□□□□□ -2.47
CKS1BP61024 MIR544B-201ENST00000582372 78 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 MTND3P19-201ENST00000603825 345 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 AC104695.3-201ENST00000604052 296 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 RNU6-88P-201ENST00000606801 100 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 AC122133.1-201ENST00000613964 233 ntBASIC-0.4□□□□□ -2.47
CKS1BP61024 RNU6-560P-201ENST00000364007 108 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms