Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AL031274.2-201ENST00000599419 203 ntBASIC1.82□□□□□ -2.12
PEX3P56589 AC016727.2-201ENST00000603988 621 ntBASIC1.82□□□□□ -2.12
PEX3P56589 AC005296.1-201ENST00000616145 209 ntBASIC1.82□□□□□ -2.12
PEX3P56589 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.82□□□□□ -2.12
PEX3P56589 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PEX3P56589 SNORA72.1-201ENST00000363485 129 ntBASIC1.81□□□□□ -2.12
PEX3P56589 RNU6-595P-201ENST00000363944 107 ntBASIC1.81□□□□□ -2.12
PEX3P56589 RNY3P14-201ENST00000384309 102 ntBASIC1.81□□□□□ -2.12
PEX3P56589 Y_RNA.473-201ENST00000384333 102 ntBASIC1.81□□□□□ -2.12
PEX3P56589 Y_RNA.482-201ENST00000384377 111 ntBASIC1.81□□□□□ -2.12
PEX3P56589 Y_RNA.533-201ENST00000384596 114 ntBASIC1.81□□□□□ -2.12
PEX3P56589 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.81□□□□□ -2.12
PEX3P56589 Y_RNA.594-201ENST00000410373 140 ntBASIC1.81□□□□□ -2.12
PEX3P56589 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.81□□□□□ -2.12
PEX3P56589 AC107399.1-201ENST00000451226 265 ntBASIC1.81□□□□□ -2.12
PEX3P56589 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.81□□□□□ -2.12
PEX3P56589 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.81□□□□□ -2.12
PEX3P56589 MTND4P17-201ENST00000470444 350 ntBASIC1.81□□□□□ -2.12
PEX3P56589 RPL30P10-201ENST00000488148 337 ntBASIC1.81□□□□□ -2.12
PEX3P56589 RNU6-1098P-201ENST00000516772 96 ntBASIC1.81□□□□□ -2.12
PEX3P56589 CBX3P4-201ENST00000538909 354 ntBASIC1.81□□□□□ -2.12
PEX3P56589 MIR3126-201ENST00000577443 74 ntBASIC1.81□□□□□ -2.12
PEX3P56589 MIR5701-3-201ENST00000578890 82 ntBASIC1.81□□□□□ -2.12
PEX3P56589 MIR5701-1-201ENST00000585138 82 ntBASIC1.81□□□□□ -2.12
PEX3P56589 RPL17P51-201ENST00000605218 238 ntBASIC1.81□□□□□ -2.12
PEX3P56589 AP000654.2-201ENST00000605633 586 ntBASIC1.81□□□□□ -2.12
PEX3P56589 MIR5701-2-201ENST00000615634 82 ntBASIC1.81□□□□□ -2.12
PEX3P56589 MTND4P12-201ENST00000498999 1377 ntBASIC1.81□□□□□ -2.12
PEX3P56589 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PEX3P56589 AC006026.1-201ENST00000444025 1803 ntBASIC1.8□□□□□ -2.12
PEX3P56589 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PEX3P56589 RNA5SP99-201ENST00000364020 114 ntBASIC1.8□□□□□ -2.12
PEX3P56589 RNU4-9P-201ENST00000364951 139 ntBASIC1.8□□□□□ -2.12
PEX3P56589 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.8□□□□□ -2.12
PEX3P56589 SNORD14D-201ENST00000384390 87 ntBASIC1.8□□□□□ -2.12
PEX3P56589 SNORA12.2-201ENST00000391040 156 ntBASIC1.8□□□□□ -2.12
PEX3P56589 RNU6-1093P-201ENST00000391194 107 ntBASIC1.8□□□□□ -2.12
PEX3P56589 RPL37P10-201ENST00000412884 288 ntBASIC1.8□□□□□ -2.12
PEX3P56589 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.8□□□□□ -2.12
PEX3P56589 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.8□□□□□ -2.12
PEX3P56589 TOMM22P6-201ENST00000465035 409 ntBASIC1.8□□□□□ -2.12
PEX3P56589 AC055731.1-201ENST00000474387 401 ntBASIC1.8□□□□□ -2.12
PEX3P56589 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.8□□□□□ -2.12
PEX3P56589 RNU2-19P-201ENST00000517288 84 ntBASIC1.8□□□□□ -2.12
PEX3P56589 AC105029.1-201ENST00000520250 669 ntBASIC1.8□□□□□ -2.12
PEX3P56589 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.8□□□□□ -2.12
PEX3P56589 AC027288.2-201ENST00000553028 243 ntBASIC1.8□□□□□ -2.12
PEX3P56589 AC090517.1-201ENST00000569307 266 ntBASIC1.8□□□□□ -2.12
PEX3P56589 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
PEX3P56589 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.8□□□□□ -2.12
PEX3P56589 AC026271.5-201ENST00000577873 130 ntBASIC1.8□□□□□ -2.12
PEX3P56589 AP001094.1-201ENST00000579805 193 ntBASIC1.8□□□□□ -2.12
PEX3P56589 AL109918.3-201ENST00000603072 338 ntBASIC1.8□□□□□ -2.12
PEX3P56589 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.8□□□□□ -2.12
PEX3P56589 ZNF299P-201ENST00000406845 1804 ntBASIC1.8□□□□□ -2.12
PEX3P56589 RNU6-1159P-201ENST00000362933 107 ntBASIC1.79□□□□□ -2.12
PEX3P56589 Y_RNA.99-201ENST00000363138 105 ntBASIC1.79□□□□□ -2.12
PEX3P56589 RNU6-17P-201ENST00000384245 107 ntBASIC1.79□□□□□ -2.12
PEX3P56589 Y_RNA.490-201ENST00000384413 102 ntBASIC1.79□□□□□ -2.12
PEX3P56589 RNU6-18P-201ENST00000384527 107 ntBASIC1.79□□□□□ -2.12
PEX3P56589 RNU6-601P-201ENST00000384540 107 ntBASIC1.79□□□□□ -2.12
PEX3P56589 MIR518A2-201ENST00000384966 87 ntBASIC1.79□□□□□ -2.12
PEX3P56589 RN7SKP101-201ENST00000411376 320 ntBASIC1.79□□□□□ -2.12
PEX3P56589 AL035666.1-201ENST00000446195 348 ntBASIC1.79□□□□□ -2.12
PEX3P56589 HMGN2P18-201ENST00000450680 270 ntBASIC1.79□□□□□ -2.12
PEX3P56589 MTND3P10-201ENST00000450967 341 ntBASIC1.79□□□□□ -2.12
PEX3P56589 AC016925.1-201ENST00000458303 298 ntBASIC1.79□□□□□ -2.12
PEX3P56589 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.79□□□□□ -2.12
PEX3P56589 RNU6-991P-201ENST00000516168 107 ntBASIC1.79□□□□□ -2.12
PEX3P56589 RNU6-277P-201ENST00000516272 106 ntBASIC1.79□□□□□ -2.12
PEX3P56589 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.79□□□□□ -2.12
PEX3P56589 CBX3P8-201ENST00000532412 525 ntBASIC1.79□□□□□ -2.12
PEX3P56589 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.79□□□□□ -2.12
PEX3P56589 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.79□□□□□ -2.12
PEX3P56589 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.79□□□□□ -2.12
PEX3P56589 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.79□□□□□ -2.12
PEX3P56589 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.79□□□□□ -2.12
PEX3P56589 UBE2V2P2-201ENST00000587677 504 ntBASIC1.79□□□□□ -2.12
PEX3P56589 AC005014.2-201ENST00000607795 599 ntBASIC1.79□□□□□ -2.12
PEX3P56589 RMST_6.1-201ENST00000611980 203 ntBASIC1.79□□□□□ -2.12
PEX3P56589 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.79□□□□□ -2.12
PEX3P56589 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.79□□□□□ -2.12
PEX3P56589 AL353997.5-201ENST00000618886 171 ntBASIC1.79□□□□□ -2.12
PEX3P56589 AL359757.2-201ENST00000624309 274 ntBASIC1.79□□□□□ -2.12
PEX3P56589 BX322639.1-202ENST00000423987 2213 ntBASIC1.79□□□□□ -2.12
PEX3P56589 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
PEX3P56589 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PEX3P56589 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PEX3P56589 SNORA18.2-201ENST00000383865 132 ntBASIC1.78□□□□□ -2.12
PEX3P56589 Y_RNA.404-201ENST00000383978 102 ntBASIC1.78□□□□□ -2.12
PEX3P56589 MIR676-201ENST00000390702 67 ntBASIC1.78□□□□□ -2.12
PEX3P56589 AL357139.1-201ENST00000407792 426 ntBASIC1.78□□□□□ -2.12
PEX3P56589 RNU6-1050P-201ENST00000410388 107 ntBASIC1.78□□□□□ -2.12
PEX3P56589 RNA5SP450-201ENST00000411206 102 ntBASIC1.78□□□□□ -2.12
PEX3P56589 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.78□□□□□ -2.12
PEX3P56589 NCOR1P3-201ENST00000420479 303 ntBASIC1.78□□□□□ -2.12
PEX3P56589 MTND4P18-201ENST00000447010 465 ntBASIC1.78□□□□□ -2.12
PEX3P56589 AC091951.2-201ENST00000500762 203 ntBASIC1.78□□□□□ -2.12
PEX3P56589 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.78□□□□□ -2.12
PEX3P56589 RNA5SP490-201ENST00000517141 136 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms