Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 MIR140-201ENST00000385282 100 ntBASIC0.03□□□□□ -2.4
CAV3P56539 RNU6-1093P-201ENST00000391194 107 ntBASIC0.03□□□□□ -2.4
CAV3P56539 AC090960.1-201ENST00000421072 306 ntBASIC0.03□□□□□ -2.4
CAV3P56539 AC012306.1-201ENST00000423267 114 ntBASIC0.03□□□□□ -2.4
CAV3P56539 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.03□□□□□ -2.4
CAV3P56539 AC104332.1-201ENST00000440471 797 ntBASIC0.03□□□□□ -2.4
CAV3P56539 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.03□□□□□ -2.4
CAV3P56539 AC093850.1-201ENST00000454121 251 ntBASIC0.03□□□□□ -2.4
CAV3P56539 AC022364.2-201ENST00000457963 554 ntBASIC0.03□□□□□ -2.4
CAV3P56539 AC079382.1-201ENST00000493346 557 ntBASIC0.03□□□□□ -2.4
CAV3P56539 AC008628.2-201ENST00000502605 298 ntBASIC0.03□□□□□ -2.4
CAV3P56539 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.03□□□□□ -2.4
CAV3P56539 RNU6-1110P-201ENST00000516462 101 ntBASIC0.03□□□□□ -2.4
CAV3P56539 RNU1-142P-201ENST00000516682 145 ntBASIC0.03□□□□□ -2.4
CAV3P56539 MTATP6P15-201ENST00000527233 835 ntBASIC0.03□□□□□ -2.4
CAV3P56539 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.03□□□□□ -2.4
CAV3P56539 AL158042.1-201ENST00000605338 460 ntBASIC0.03□□□□□ -2.4
CAV3P56539 AC008250.2-201ENST00000615261 205 ntBASIC0.03□□□□□ -2.4
CAV3P56539 MIR6718-201ENST00000616153 80 ntBASIC0.03□□□□□ -2.4
CAV3P56539 AC019226.2-201ENST00000625973 424 ntBASIC0.03□□□□□ -2.4
CAV3P56539 Y_RNA.22-201ENST00000362492 102 ntBASIC0.02□□□□□ -2.41
CAV3P56539 Y_RNA.97-201ENST00000363094 102 ntBASIC0.02□□□□□ -2.41
CAV3P56539 SNORD114-26-201ENST00000363543 72 ntBASIC0.02□□□□□ -2.41
CAV3P56539 RNU4-45P-201ENST00000365469 141 ntBASIC0.02□□□□□ -2.41
CAV3P56539 RNU6-163P-201ENST00000384396 106 ntBASIC0.02□□□□□ -2.41
CAV3P56539 RNU6-1067P-201ENST00000384752 107 ntBASIC0.02□□□□□ -2.41
CAV3P56539 MIR1253-201ENST00000408273 105 ntBASIC0.02□□□□□ -2.41
CAV3P56539 RNU2-39P-201ENST00000410604 198 ntBASIC0.02□□□□□ -2.41
CAV3P56539 RNU6-57P-201ENST00000411348 103 ntBASIC0.02□□□□□ -2.41
CAV3P56539 AL117339.3-201ENST00000418733 162 ntBASIC0.02□□□□□ -2.41
CAV3P56539 MTCYBP10-201ENST00000424905 650 ntBASIC0.02□□□□□ -2.41
CAV3P56539 AL356583.2-201ENST00000426536 280 ntBASIC0.02□□□□□ -2.41
CAV3P56539 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.02□□□□□ -2.41
CAV3P56539 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.02□□□□□ -2.41
CAV3P56539 RNU6-567P-201ENST00000516746 107 ntBASIC0.02□□□□□ -2.41
CAV3P56539 AC022868.1-201ENST00000517767 391 ntBASIC0.02□□□□□ -2.41
CAV3P56539 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.02□□□□□ -2.41
CAV3P56539 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.02□□□□□ -2.41
CAV3P56539 ZNF519P3-201ENST00000557158 1032 ntBASIC0.02□□□□□ -2.41
CAV3P56539 AL391840.1-201ENST00000571144 367 ntBASIC0.02□□□□□ -2.41
CAV3P56539 SNRPGP20-201ENST00000604477 205 ntBASIC0.02□□□□□ -2.41
CAV3P56539 AC080013.3-201ENST00000606839 578 ntBASIC0.02□□□□□ -2.41
CAV3P56539 AC100812.1-201ENST00000607622 580 ntBASIC0.02□□□□□ -2.41
CAV3P56539 RNU6-94P-201ENST00000607728 107 ntBASIC0.02□□□□□ -2.41
CAV3P56539 AL359075.3-201ENST00000613288 217 ntBASIC0.02□□□□□ -2.41
CAV3P56539 MIR7111-201ENST00000619751 72 ntBASIC0.02□□□□□ -2.41
CAV3P56539 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
CAV3P56539 RNU4-41P-201ENST00000364426 143 ntBASIC0.01□□□□□ -2.41
CAV3P56539 RNU6-177P-201ENST00000411257 104 ntBASIC0.01□□□□□ -2.41
CAV3P56539 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.01□□□□□ -2.41
CAV3P56539 RPS3AP3-201ENST00000411933 242 ntBASIC0.01□□□□□ -2.41
CAV3P56539 MTND3P17-201ENST00000416968 344 ntBASIC0.01□□□□□ -2.41
CAV3P56539 CALM2P4-201ENST00000430810 426 ntBASIC0.01□□□□□ -2.41
CAV3P56539 AC004386.2-201ENST00000441858 148 ntBASIC0.01□□□□□ -2.41
CAV3P56539 STAG3L5P-204ENST00000443759 179 ntBASIC0.01□□□□□ -2.41
CAV3P56539 MTCO2P18-201ENST00000457151 658 ntBASIC0.01□□□□□ -2.41
CAV3P56539 snoU13.6-201ENST00000458785 104 ntBASIC0.01□□□□□ -2.41
CAV3P56539 OR9P1P-201ENST00000496431 281 ntBASIC0.01□□□□□ -2.41
CAV3P56539 AC117522.1-201ENST00000509821 380 ntBASIC0.01□□□□□ -2.41
CAV3P56539 AC103996.1-201ENST00000555468 102 ntBASIC0.01□□□□□ -2.41
CAV3P56539 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.01□□□□□ -2.41
CAV3P56539 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.01□□□□□ -2.41
CAV3P56539 AC234772.3-201ENST00000602277 528 ntBASIC0.01□□□□□ -2.41
CAV3P56539 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.01□□□□□ -2.41
CAV3P56539 AC005562.2-201ENST00000618264 111 ntBASIC0.01□□□□□ -2.41
CAV3P56539 AL078595.3-201ENST00000623815 1166 ntBASIC0.01□□□□□ -2.41
CAV3P56539 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.01□□□□□ -2.41
CAV3P56539 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.01□□□□□ -2.41
CAV3P56539 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.01□□□□□ -2.41
CAV3P56539 RNA5SP264-201ENST00000363115 107 ntBASIC0□□□□□ -2.41
CAV3P56539 RNU6-641P-201ENST00000384006 107 ntBASIC0□□□□□ -2.41
CAV3P56539 RNU6-809P-201ENST00000384461 107 ntBASIC0□□□□□ -2.41
CAV3P56539 Y_RNA.576-201ENST00000384781 102 ntBASIC0□□□□□ -2.41
CAV3P56539 MIR558-201ENST00000384920 94 ntBASIC0□□□□□ -2.41
CAV3P56539 U8.16-201ENST00000391279 133 ntBASIC0□□□□□ -2.41
CAV3P56539 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0□□□□□ -2.41
CAV3P56539 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0□□□□□ -2.41
CAV3P56539 TPT1P7-201ENST00000458300 517 ntBASIC0□□□□□ -2.41
CAV3P56539 LINC01399-202ENST00000458450 244 ntBASIC0□□□□□ -2.41
CAV3P56539 CYCTP-201ENST00000504253 315 ntBASIC0□□□□□ -2.41
CAV3P56539 AC025647.1-201ENST00000517879 253 ntBASIC0□□□□□ -2.41
CAV3P56539 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0□□□□□ -2.41
CAV3P56539 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0□□□□□ -2.41
CAV3P56539 AC004584.2-201ENST00000570407 410 ntBASIC0□□□□□ -2.41
CAV3P56539 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
CAV3P56539 AC004223.2-201ENST00000590309 544 ntBASIC0□□□□□ -2.41
CAV3P56539 RAC1P9-201ENST00000604990 392 ntBASIC0□□□□□ -2.41
CAV3P56539 LARP7P1-201ENST00000605576 316 ntBASIC0□□□□□ -2.41
CAV3P56539 PART1_2.1-201ENST00000612397 250 ntBASIC0□□□□□ -2.41
CAV3P56539 AC008133.2-201ENST00000624540 351 ntBASIC0□□□□□ -2.41
CAV3P56539 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0□□□□□ -2.41
CAV3P56539 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.01□□□□□ -2.41
CAV3P56539 SNORD44.1-201ENST00000363202 61 ntBASIC-0.01□□□□□ -2.41
CAV3P56539 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.01□□□□□ -2.41
CAV3P56539 RNU6-116P-201ENST00000384042 109 ntBASIC-0.01□□□□□ -2.41
CAV3P56539 RNU6-424P-201ENST00000384367 105 ntBASIC-0.01□□□□□ -2.41
CAV3P56539 RNA5SP219-201ENST00000390940 113 ntBASIC-0.01□□□□□ -2.41
CAV3P56539 RNA5SP504-201ENST00000410676 117 ntBASIC-0.01□□□□□ -2.41
CAV3P56539 RNU2-8P-201ENST00000410727 190 ntBASIC-0.01□□□□□ -2.41
CAV3P56539 AL663109.1-201ENST00000411498 844 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms