Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
CDH13P55290 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH13P55290 AC105029.1-201ENST00000520250 669 ntBASIC1.97□□□□□ -2.09
CDH13P55290 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH13P55290 AC005730.3-201ENST00000583067 366 ntBASIC1.97□□□□□ -2.09
CDH13P55290 MIR4753-201ENST00000585119 83 ntBASIC1.97□□□□□ -2.09
CDH13P55290 AL109918.3-201ENST00000603072 338 ntBASIC1.97□□□□□ -2.09
CDH13P55290 AC005014.2-201ENST00000607795 599 ntBASIC1.97□□□□□ -2.09
CDH13P55290 AC025253.1-201ENST00000613623 543 ntBASIC1.97□□□□□ -2.09
CDH13P55290 AL590240.4-201ENST00000616908 390 ntBASIC1.97□□□□□ -2.09
CDH13P55290 ZNF702P-202ENST00000434269 1966 ntBASIC1.97□□□□□ -2.09
CDH13P55290 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CDH13P55290 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
CDH13P55290 Y_RNA.48-201ENST00000362710 103 ntBASIC1.96□□□□□ -2.1
CDH13P55290 RNY1P16-201ENST00000363063 111 ntBASIC1.96□□□□□ -2.1
CDH13P55290 Y_RNA.473-201ENST00000384333 102 ntBASIC1.96□□□□□ -2.1
CDH13P55290 SNORA64-201ENST00000384674 134 ntBASIC1.96□□□□□ -2.1
CDH13P55290 MIR549A-201ENST00000385268 96 ntBASIC1.96□□□□□ -2.1
CDH13P55290 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
CDH13P55290 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.96□□□□□ -2.1
CDH13P55290 AC010531.2-201ENST00000465012 153 ntBASIC1.96□□□□□ -2.1
CDH13P55290 RPL7P42-201ENST00000481005 679 ntBASIC1.96□□□□□ -2.1
CDH13P55290 AC008413.1-201ENST00000511864 177 ntBASIC1.96□□□□□ -2.1
CDH13P55290 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.96□□□□□ -2.1
CDH13P55290 MIR5089-201ENST00000580047 84 ntBASIC1.96□□□□□ -2.1
CDH13P55290 AC005786.1-201ENST00000588553 154 ntBASIC1.96□□□□□ -2.1
CDH13P55290 SNRPGP19-201ENST00000603826 189 ntBASIC1.96□□□□□ -2.1
CDH13P55290 AC113139.1-201ENST00000605049 239 ntBASIC1.96□□□□□ -2.1
CDH13P55290 AC016727.1-205ENST00000605437 569 ntBASIC1.96□□□□□ -2.1
CDH13P55290 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.96□□□□□ -2.1
CDH13P55290 AL590808.1-201ENST00000618696 141 ntBASIC1.96□□□□□ -2.1
CDH13P55290 AL162373.1-201ENST00000620433 407 ntBASIC1.96□□□□□ -2.1
CDH13P55290 AC008873.1-201ENST00000625051 138 ntBASIC1.96□□□□□ -2.1
CDH13P55290 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.96□□□□□ -2.1
CDH13P55290 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
CDH13P55290 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.95□□□□□ -2.1
CDH13P55290 Y_RNA.303-201ENST00000364998 94 ntBASIC1.95□□□□□ -2.1
CDH13P55290 Y_RNA.404-201ENST00000383978 102 ntBASIC1.95□□□□□ -2.1
CDH13P55290 SNORA67.2-201ENST00000384300 149 ntBASIC1.95□□□□□ -2.1
CDH13P55290 MIR597-201ENST00000384968 97 ntBASIC1.95□□□□□ -2.1
CDH13P55290 RNU6-700P-201ENST00000391043 107 ntBASIC1.95□□□□□ -2.1
CDH13P55290 RNU1-139P-201ENST00000391307 165 ntBASIC1.95□□□□□ -2.1
CDH13P55290 RNU4-14P-201ENST00000410858 122 ntBASIC1.95□□□□□ -2.1
CDH13P55290 AL135786.1-201ENST00000415892 214 ntBASIC1.95□□□□□ -2.1
CDH13P55290 MTCYBP10-201ENST00000424905 650 ntBASIC1.95□□□□□ -2.1
CDH13P55290 AL353689.1-201ENST00000438895 199 ntBASIC1.95□□□□□ -2.1
CDH13P55290 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.95□□□□□ -2.1
CDH13P55290 AC074290.1-201ENST00000448883 135 ntBASIC1.95□□□□□ -2.1
CDH13P55290 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.95□□□□□ -2.1
CDH13P55290 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.95□□□□□ -2.1
CDH13P55290 RNU6-948P-201ENST00000516374 107 ntBASIC1.95□□□□□ -2.1
CDH13P55290 SNORA25.14-201ENST00000516481 132 ntBASIC1.95□□□□□ -2.1
CDH13P55290 RNA5SP384-201ENST00000516615 116 ntBASIC1.95□□□□□ -2.1
CDH13P55290 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.95□□□□□ -2.1
CDH13P55290 AP005660.1-201ENST00000522972 293 ntBASIC1.95□□□□□ -2.1
CDH13P55290 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.95□□□□□ -2.1
CDH13P55290 MIR5690-201ENST00000583739 73 ntBASIC1.95□□□□□ -2.1
CDH13P55290 AL669831.3-213ENST00000636676 183 ntBASIC1.95□□□□□ -2.1
CDH13P55290 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CDH13P55290 CENPCP1-201ENST00000533085 2578 ntBASIC1.95□□□□□ -2.1
CDH13P55290 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CDH13P55290 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDH13P55290 RNU6-873P-201ENST00000363833 107 ntBASIC1.94□□□□□ -2.1
CDH13P55290 RNU6-975P-201ENST00000384296 105 ntBASIC1.94□□□□□ -2.1
CDH13P55290 RNU6-1235P-201ENST00000384559 107 ntBASIC1.94□□□□□ -2.1
CDH13P55290 SNORA48.1-201ENST00000390879 135 ntBASIC1.94□□□□□ -2.1
CDH13P55290 MIR190B-201ENST00000401119 79 ntBASIC1.94□□□□□ -2.1
CDH13P55290 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
CDH13P55290 RNU2-40P-201ENST00000410833 196 ntBASIC1.94□□□□□ -2.1
CDH13P55290 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.94□□□□□ -2.1
CDH13P55290 MTCO3P29-201ENST00000432119 779 ntBASIC1.94□□□□□ -2.1
CDH13P55290 RNA5SP233-201ENST00000459153 113 ntBASIC1.94□□□□□ -2.1
CDH13P55290 RNU6-498P-201ENST00000459468 107 ntBASIC1.94□□□□□ -2.1
CDH13P55290 MTND4P17-201ENST00000470444 350 ntBASIC1.94□□□□□ -2.1
CDH13P55290 HMGN2P9-201ENST00000476875 229 ntBASIC1.94□□□□□ -2.1
CDH13P55290 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.94□□□□□ -2.1
CDH13P55290 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.94□□□□□ -2.1
CDH13P55290 AC008549.1-201ENST00000512900 643 ntBASIC1.94□□□□□ -2.1
CDH13P55290 AL117351.2-201ENST00000513571 157 ntBASIC1.94□□□□□ -2.1
CDH13P55290 RNU6-1114P-201ENST00000516022 107 ntBASIC1.94□□□□□ -2.1
CDH13P55290 RNU6-856P-201ENST00000516959 98 ntBASIC1.94□□□□□ -2.1
CDH13P55290 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.94□□□□□ -2.1
CDH13P55290 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.94□□□□□ -2.1
CDH13P55290 MIR548S-201ENST00000581352 82 ntBASIC1.94□□□□□ -2.1
CDH13P55290 AC005034.5-201ENST00000604219 466 ntBASIC1.94□□□□□ -2.1
CDH13P55290 AL355802.3-201ENST00000607571 545 ntBASIC1.94□□□□□ -2.1
CDH13P55290 SNORD11B-201ENST00000607707 90 ntBASIC1.94□□□□□ -2.1
CDH13P55290 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.94□□□□□ -2.1
CDH13P55290 SDR42E1P4-201ENST00000620894 481 ntBASIC1.94□□□□□ -2.1
CDH13P55290 AL359851.1-201ENST00000569460 4997 ntBASIC1.93□□□□□ -2.1
CDH13P55290 RNU6-1188P-201ENST00000363795 107 ntBASIC1.93□□□□□ -2.1
CDH13P55290 MIR10B-201ENST00000385011 110 ntBASIC1.93□□□□□ -2.1
CDH13P55290 RNA5SP212-201ENST00000391223 107 ntBASIC1.93□□□□□ -2.1
CDH13P55290 RNU6-370P-201ENST00000411008 104 ntBASIC1.93□□□□□ -2.1
CDH13P55290 AL356320.1-201ENST00000429616 163 ntBASIC1.93□□□□□ -2.1
CDH13P55290 MTND3P23-201ENST00000431980 347 ntBASIC1.93□□□□□ -2.1
CDH13P55290 NDUFB4P10-201ENST00000452541 359 ntBASIC1.93□□□□□ -2.1
CDH13P55290 AP000870.1-201ENST00000472927 406 ntBASIC1.93□□□□□ -2.1
CDH13P55290 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.93□□□□□ -2.1
CDH13P55290 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms