Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RAB28P51157 AL356432.1-201ENST00000405809 419 ntBASIC1.9□□□□□ -2.11
RAB28P51157 MIR548F5-201ENST00000408421 86 ntBASIC1.9□□□□□ -2.11
RAB28P51157 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
RAB28P51157 HMGN2P38-201ENST00000423806 265 ntBASIC1.9□□□□□ -2.11
RAB28P51157 AL445305.1-201ENST00000432577 575 ntBASIC1.9□□□□□ -2.11
RAB28P51157 HMGB1P18-201ENST00000438801 619 ntBASIC1.9□□□□□ -2.11
RAB28P51157 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.9□□□□□ -2.11
RAB28P51157 AL357134.1-201ENST00000445848 426 ntBASIC1.9□□□□□ -2.11
RAB28P51157 SNORD5.1-201ENST00000458800 75 ntBASIC1.9□□□□□ -2.11
RAB28P51157 RNU6-717P-201ENST00000459076 104 ntBASIC1.9□□□□□ -2.11
RAB28P51157 AC079804.2-201ENST00000490376 200 ntBASIC1.9□□□□□ -2.11
RAB28P51157 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.9□□□□□ -2.11
RAB28P51157 RNU6-1198P-201ENST00000516904 67 ntBASIC1.9□□□□□ -2.11
RAB28P51157 RNU6-58P-201ENST00000517143 103 ntBASIC1.9□□□□□ -2.11
RAB28P51157 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.9□□□□□ -2.11
RAB28P51157 MIR4524B-201ENST00000581569 115 ntBASIC1.9□□□□□ -2.11
RAB28P51157 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
RAB28P51157 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.9□□□□□ -2.11
RAB28P51157 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RAB28P51157 ZNF299P-201ENST00000406845 1804 ntBASIC1.89□□□□□ -2.11
RAB28P51157 Y_RNA.160-201ENST00000363677 92 ntBASIC1.89□□□□□ -2.11
RAB28P51157 SNORD115-8-201ENST00000363856 82 ntBASIC1.89□□□□□ -2.11
RAB28P51157 SNORD115-38-201ENST00000365037 82 ntBASIC1.89□□□□□ -2.11
RAB28P51157 Y_RNA.473-201ENST00000384333 102 ntBASIC1.89□□□□□ -2.11
RAB28P51157 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAB28P51157 MIR548K-201ENST00000408406 116 ntBASIC1.89□□□□□ -2.11
RAB28P51157 AC074085.1-201ENST00000413598 418 ntBASIC1.89□□□□□ -2.11
RAB28P51157 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB28P51157 MTND1P2-201ENST00000430604 821 ntBASIC1.89□□□□□ -2.11
RAB28P51157 RPS3AP52-201ENST00000435639 297 ntBASIC1.89□□□□□ -2.11
RAB28P51157 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.89□□□□□ -2.11
RAB28P51157 AC016717.1-201ENST00000448918 286 ntBASIC1.89□□□□□ -2.11
RAB28P51157 ATP5J2P3-201ENST00000451550 258 ntBASIC1.89□□□□□ -2.11
RAB28P51157 AC114982.1-201ENST00000469402 321 ntBASIC1.89□□□□□ -2.11
RAB28P51157 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.89□□□□□ -2.11
RAB28P51157 RNU1-117P-201ENST00000517041 158 ntBASIC1.89□□□□□ -2.11
RAB28P51157 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB28P51157 AC027288.2-201ENST00000553028 243 ntBASIC1.89□□□□□ -2.11
RAB28P51157 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB28P51157 MIR5094-201ENST00000578766 85 ntBASIC1.89□□□□□ -2.11
RAB28P51157 AC005296.1-201ENST00000616145 209 ntBASIC1.89□□□□□ -2.11
RAB28P51157 Y_RNA.48-201ENST00000362710 103 ntBASIC1.88□□□□□ -2.11
RAB28P51157 RNU6-767P-201ENST00000384132 107 ntBASIC1.88□□□□□ -2.11
RAB28P51157 RNU6-876P-201ENST00000391295 104 ntBASIC1.88□□□□□ -2.11
RAB28P51157 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.88□□□□□ -2.11
RAB28P51157 snoU13.23-201ENST00000458863 104 ntBASIC1.88□□□□□ -2.11
RAB28P51157 HMGN2P9-201ENST00000476875 229 ntBASIC1.88□□□□□ -2.11
RAB28P51157 AC067942.3-201ENST00000512025 362 ntBASIC1.88□□□□□ -2.11
RAB28P51157 RNU7-175P-201ENST00000515915 61 ntBASIC1.88□□□□□ -2.11
RAB28P51157 SNORA25.14-201ENST00000516481 132 ntBASIC1.88□□□□□ -2.11
RAB28P51157 RNU6-1016P-201ENST00000516689 94 ntBASIC1.88□□□□□ -2.11
RAB28P51157 RNU6-856P-201ENST00000516959 98 ntBASIC1.88□□□□□ -2.11
RAB28P51157 AP003033.1-201ENST00000527244 415 ntBASIC1.88□□□□□ -2.11
RAB28P51157 AL590705.4-201ENST00000532209 134 ntBASIC1.88□□□□□ -2.11
RAB28P51157 AC018462.2-201ENST00000605375 395 ntBASIC1.88□□□□□ -2.11
RAB28P51157 AC098657.3-201ENST00000620434 263 ntBASIC1.88□□□□□ -2.11
RAB28P51157 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
RAB28P51157 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.87□□□□□ -2.11
RAB28P51157 RNU6-595P-201ENST00000363944 107 ntBASIC1.87□□□□□ -2.11
RAB28P51157 RNU6-245P-201ENST00000384020 107 ntBASIC1.87□□□□□ -2.11
RAB28P51157 RNU6-17P-201ENST00000384245 107 ntBASIC1.87□□□□□ -2.11
RAB28P51157 RNU6-18P-201ENST00000384527 107 ntBASIC1.87□□□□□ -2.11
RAB28P51157 MIR583-201ENST00000384846 75 ntBASIC1.87□□□□□ -2.11
RAB28P51157 MIR586-201ENST00000385035 97 ntBASIC1.87□□□□□ -2.11
RAB28P51157 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RAB28P51157 RNA5SP100-201ENST00000410903 110 ntBASIC1.87□□□□□ -2.11
RAB28P51157 RNA5SP59-201ENST00000410922 110 ntBASIC1.87□□□□□ -2.11
RAB28P51157 AC009310.1-201ENST00000414414 451 ntBASIC1.87□□□□□ -2.11
RAB28P51157 NCOR1P3-201ENST00000420479 303 ntBASIC1.87□□□□□ -2.11
RAB28P51157 AL591806.2-201ENST00000433122 173 ntBASIC1.87□□□□□ -2.11
RAB28P51157 AC107399.1-201ENST00000451226 265 ntBASIC1.87□□□□□ -2.11
RAB28P51157 RN7SKP210-201ENST00000459176 261 ntBASIC1.87□□□□□ -2.11
RAB28P51157 AC108210.2-201ENST00000503681 201 ntBASIC1.87□□□□□ -2.11
RAB28P51157 AC046134.1-201ENST00000514454 666 ntBASIC1.87□□□□□ -2.11
RAB28P51157 RNU6-948P-201ENST00000516374 107 ntBASIC1.87□□□□□ -2.11
RAB28P51157 RNU7-30P-201ENST00000516835 62 ntBASIC1.87□□□□□ -2.11
RAB28P51157 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.87□□□□□ -2.11
RAB28P51157 AC022254.1-201ENST00000567857 235 ntBASIC1.87□□□□□ -2.11
RAB28P51157 AC005668.1-201ENST00000571142 476 ntBASIC1.87□□□□□ -2.11
RAB28P51157 MIR4713-201ENST00000582691 75 ntBASIC1.87□□□□□ -2.11
RAB28P51157 AC011494.1-201ENST00000596454 237 ntBASIC1.87□□□□□ -2.11
RAB28P51157 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.87□□□□□ -2.11
RAB28P51157 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.87□□□□□ -2.11
RAB28P51157 AC091932.3-201ENST00000624223 323 ntBASIC1.87□□□□□ -2.11
RAB28P51157 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RAB28P51157 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
RAB28P51157 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RAB28P51157 RNU6-873P-201ENST00000363833 107 ntBASIC1.86□□□□□ -2.11
RAB28P51157 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RAB28P51157 Y_RNA.405-201ENST00000383979 100 ntBASIC1.86□□□□□ -2.11
RAB28P51157 Y_RNA.451-201ENST00000384200 100 ntBASIC1.86□□□□□ -2.11
RAB28P51157 RNU6-975P-201ENST00000384296 105 ntBASIC1.86□□□□□ -2.11
RAB28P51157 Y_RNA.524-201ENST00000384564 100 ntBASIC1.86□□□□□ -2.11
RAB28P51157 Y_RNA.561-201ENST00000384694 100 ntBASIC1.86□□□□□ -2.11
RAB28P51157 Y_RNA.594-201ENST00000410373 140 ntBASIC1.86□□□□□ -2.11
RAB28P51157 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.86□□□□□ -2.11
RAB28P51157 MTCO3P29-201ENST00000432119 779 ntBASIC1.86□□□□□ -2.11
RAB28P51157 AC074290.1-201ENST00000448883 135 ntBASIC1.86□□□□□ -2.11
RAB28P51157 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms