Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CTCFP49711 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.02
CTCFP49711 RNU6-392P-201ENST00000364926 101 ntBASIC2.4□□□□□ -2.03
CTCFP49711 Y_RNA.327-201ENST00000365201 102 ntBASIC2.4□□□□□ -2.03
CTCFP49711 EDDM3CP-201ENST00000415977 425 ntBASIC2.4□□□□□ -2.03
CTCFP49711 POLR2J4-204ENST00000418424 324 ntBASIC2.4□□□□□ -2.03
CTCFP49711 Z82188.1-201ENST00000436709 154 ntBASIC2.4□□□□□ -2.03
CTCFP49711 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.4□□□□□ -2.03
CTCFP49711 SNORA4.4-201ENST00000515921 135 ntBASIC2.4□□□□□ -2.03
CTCFP49711 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
CTCFP49711 RNU6-277P-201ENST00000516272 106 ntBASIC2.4□□□□□ -2.03
CTCFP49711 RNU7-193P-201ENST00000516723 65 ntBASIC2.4□□□□□ -2.03
CTCFP49711 Y_RNA.708-201ENST00000516950 96 ntBASIC2.4□□□□□ -2.03
CTCFP49711 SNORA31.25-201ENST00000517242 134 ntBASIC2.4□□□□□ -2.03
CTCFP49711 AC134698.4-201ENST00000523451 826 ntBASIC2.4□□□□□ -2.03
CTCFP49711 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.4□□□□□ -2.03
CTCFP49711 MIR3126-201ENST00000577443 74 ntBASIC2.4□□□□□ -2.03
CTCFP49711 MIR4273-201ENST00000582824 84 ntBASIC2.4□□□□□ -2.03
CTCFP49711 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.4□□□□□ -2.03
CTCFP49711 AL132765.2-201ENST00000610812 351 ntBASIC2.4□□□□□ -2.03
CTCFP49711 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.4□□□□□ -2.03
CTCFP49711 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.4□□□□□ -2.03
CTCFP49711 MIR1248-201ENST00000629190 106 ntBASIC2.4□□□□□ -2.03
CTCFP49711 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CTCFP49711 KPNA2P1-201ENST00000458289 1591 ntBASIC2.4□□□□□ -2.03
CTCFP49711 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CTCFP49711 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
CTCFP49711 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.39□□□□□ -2.03
CTCFP49711 Y_RNA.404-201ENST00000383978 102 ntBASIC2.39□□□□□ -2.03
CTCFP49711 SNORA67.5-201ENST00000391036 107 ntBASIC2.39□□□□□ -2.03
CTCFP49711 MIR1294-201ENST00000408503 142 ntBASIC2.39□□□□□ -2.03
CTCFP49711 OR2AQ1P-201ENST00000451972 200 ntBASIC2.39□□□□□ -2.03
CTCFP49711 TOMM22P6-201ENST00000465035 409 ntBASIC2.39□□□□□ -2.03
CTCFP49711 RPL7P42-201ENST00000481005 679 ntBASIC2.39□□□□□ -2.03
CTCFP49711 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.39□□□□□ -2.03
CTCFP49711 AC087441.2-201ENST00000529141 262 ntBASIC2.39□□□□□ -2.03
CTCFP49711 AC233702.2-202ENST00000562547 291 ntBASIC2.39□□□□□ -2.03
CTCFP49711 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.39□□□□□ -2.03
CTCFP49711 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CTCFP49711 ZNF299P-201ENST00000406845 1804 ntBASIC2.38□□□□□ -2.03
CTCFP49711 Y_RNA.36-201ENST00000362602 112 ntBASIC2.38□□□□□ -2.03
CTCFP49711 Y_RNA.178-201ENST00000363832 102 ntBASIC2.38□□□□□ -2.03
CTCFP49711 RNU4-9P-201ENST00000364951 139 ntBASIC2.38□□□□□ -2.03
CTCFP49711 RNU6-611P-201ENST00000384276 104 ntBASIC2.38□□□□□ -2.03
CTCFP49711 RNU6-1009P-201ENST00000390996 107 ntBASIC2.38□□□□□ -2.03
CTCFP49711 RNU6-1093P-201ENST00000391194 107 ntBASIC2.38□□□□□ -2.03
CTCFP49711 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.38□□□□□ -2.03
CTCFP49711 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.38□□□□□ -2.03
CTCFP49711 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.38□□□□□ -2.03
CTCFP49711 RPS4XP11-201ENST00000446897 772 ntBASIC2.38□□□□□ -2.03
CTCFP49711 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.38□□□□□ -2.03
CTCFP49711 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.38□□□□□ -2.03
CTCFP49711 FGF7P4-201ENST00000509595 295 ntBASIC2.38□□□□□ -2.03
CTCFP49711 CBX3P8-201ENST00000532412 525 ntBASIC2.38□□□□□ -2.03
CTCFP49711 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.38□□□□□ -2.03
CTCFP49711 AC011604.1-201ENST00000545978 196 ntBASIC2.38□□□□□ -2.03
CTCFP49711 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.38□□□□□ -2.03
CTCFP49711 MIR4529-201ENST00000578110 78 ntBASIC2.38□□□□□ -2.03
CTCFP49711 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.38□□□□□ -2.03
CTCFP49711 AC113139.1-201ENST00000605049 239 ntBASIC2.38□□□□□ -2.03
CTCFP49711 AC022202.1-201ENST00000613515 211 ntBASIC2.38□□□□□ -2.03
CTCFP49711 AC025253.1-201ENST00000613623 543 ntBASIC2.38□□□□□ -2.03
CTCFP49711 AP000553.5-201ENST00000641933 54 ntBASIC2.38□□□□□ -2.03
CTCFP49711 AC008555.8-201ENST00000623602 2168 ntBASIC2.37□□□□□ -2.03
CTCFP49711 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CTCFP49711 MIRLET7G-201ENST00000362280 84 ntBASIC2.37□□□□□ -2.03
CTCFP49711 Y_RNA.48-201ENST00000362710 103 ntBASIC2.37□□□□□ -2.03
CTCFP49711 RNU6-595P-201ENST00000363944 107 ntBASIC2.37□□□□□ -2.03
CTCFP49711 Y_RNA.263-201ENST00000364659 114 ntBASIC2.37□□□□□ -2.03
CTCFP49711 RNU6-26P-201ENST00000383985 107 ntBASIC2.37□□□□□ -2.03
CTCFP49711 MIR487A-201ENST00000385009 80 ntBASIC2.37□□□□□ -2.03
CTCFP49711 SNORA75.4-201ENST00000391278 119 ntBASIC2.37□□□□□ -2.03
CTCFP49711 AC107032.1-201ENST00000485945 480 ntBASIC2.37□□□□□ -2.03
CTCFP49711 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.37□□□□□ -2.03
CTCFP49711 RNA5SP384-201ENST00000516615 116 ntBASIC2.37□□□□□ -2.03
CTCFP49711 RNU6-1213P-201ENST00000517075 94 ntBASIC2.37□□□□□ -2.03
CTCFP49711 RNU2-19P-201ENST00000517288 84 ntBASIC2.37□□□□□ -2.03
CTCFP49711 DEFB131C-201ENST00000528817 165 ntBASIC2.37□□□□□ -2.03
CTCFP49711 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.37□□□□□ -2.03
CTCFP49711 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CTCFP49711 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.36□□□□□ -2.03
CTCFP49711 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.36□□□□□ -2.03
CTCFP49711 AL391987.6-201ENST00000305671 199 ntBASIC2.36□□□□□ -2.03
CTCFP49711 Y_RNA.70-201ENST00000362886 110 ntBASIC2.36□□□□□ -2.03
CTCFP49711 SNORD115-32-201ENST00000364079 82 ntBASIC2.36□□□□□ -2.03
CTCFP49711 SNORA48.3-201ENST00000391081 134 ntBASIC2.36□□□□□ -2.03
CTCFP49711 RNU2-41P-201ENST00000410991 178 ntBASIC2.36□□□□□ -2.03
CTCFP49711 RNU6-370P-201ENST00000411008 104 ntBASIC2.36□□□□□ -2.03
CTCFP49711 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.36□□□□□ -2.03
CTCFP49711 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.36□□□□□ -2.03
CTCFP49711 RPS27P21-201ENST00000486977 252 ntBASIC2.36□□□□□ -2.03
CTCFP49711 RPL30P10-201ENST00000488148 337 ntBASIC2.36□□□□□ -2.03
CTCFP49711 AC090255.1-201ENST00000495779 349 ntBASIC2.36□□□□□ -2.03
CTCFP49711 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.36□□□□□ -2.03
CTCFP49711 AP005660.1-201ENST00000522972 293 ntBASIC2.36□□□□□ -2.03
CTCFP49711 APOOP3-201ENST00000536787 586 ntBASIC2.36□□□□□ -2.03
CTCFP49711 AC026271.5-201ENST00000577873 130 ntBASIC2.36□□□□□ -2.03
CTCFP49711 AC007229.1-201ENST00000590455 412 ntBASIC2.36□□□□□ -2.03
CTCFP49711 AC016727.2-201ENST00000603988 621 ntBASIC2.36□□□□□ -2.03
CTCFP49711 AC005014.2-201ENST00000607795 599 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms