Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.91□□□□□ -2.1
NEDD4P46934 AC005899.2-201ENST00000584353 90 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 SNORD14A-201ENST00000606526 91 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.91□□□□□ -2.1
NEDD4P46934 PISRT1.1-201ENST00000616930 107 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 AC092794.2-201ENST00000620933 563 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
NEDD4P46934 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NEDD4P46934 RNU6-137P-201ENST00000363680 108 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 RNU6-1059P-201ENST00000363752 98 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 RNU6-595P-201ENST00000363944 107 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 RNU6-234P-201ENST00000365229 104 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 RNY3P14-201ENST00000384309 102 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 RNU6-1009P-201ENST00000390996 107 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 AL357139.1-201ENST00000407792 426 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 MIR1323-201ENST00000408090 73 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 MIR320B2-201ENST00000408479 138 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 Y_RNA.594-201ENST00000410373 140 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 AC243428.1-201ENST00000421099 264 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 snoU13.30-201ENST00000458951 104 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 FO393415.2-201ENST00000480085 343 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 AC091951.2-201ENST00000500762 203 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.9□□□□□ -2.11
NEDD4P46934 RNU7-175P-201ENST00000515915 61 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 RNU6-307P-201ENST00000516743 106 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 Y_RNA.702-201ENST00000516843 96 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.9□□□□□ -2.11
NEDD4P46934 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.9□□□□□ -2.11
NEDD4P46934 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.9□□□□□ -2.11
NEDD4P46934 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.9□□□□□ -2.11
NEDD4P46934 AC113139.1-201ENST00000605049 239 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 AC012640.5-201ENST00000623897 319 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.9□□□□□ -2.11
NEDD4P46934 MIR1248-201ENST00000629190 106 ntBASIC1.9□□□□□ -2.11
NEDD4P46934 AC131280.1-202ENST00000624067 4211 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NEDD4P46934 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
NEDD4P46934 SNORD115-8-201ENST00000363856 82 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 SNORD115-38-201ENST00000365037 82 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 RNA5SP363-201ENST00000365072 115 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 MIR153-2-201ENST00000385225 87 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 RNU2-41P-201ENST00000410991 178 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 MTND4LP11-201ENST00000422184 280 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 AC093019.1-201ENST00000443135 252 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 AL035666.1-201ENST00000446195 348 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 AC107032.1-201ENST00000485945 480 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.89□□□□□ -2.11
NEDD4P46934 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.89□□□□□ -2.11
NEDD4P46934 RNU6-875P-201ENST00000516488 106 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 RNA5SP54-201ENST00000516951 92 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.89□□□□□ -2.11
NEDD4P46934 AL590705.4-201ENST00000532209 134 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 AC233702.2-202ENST00000562547 291 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 MIR5690-201ENST00000583739 73 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 SNRPGP20-201ENST00000604477 205 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 AC016727.1-205ENST00000605437 569 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 AC009229.3-201ENST00000608056 282 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 AL359697.1-201ENST00000624879 587 ntBASIC1.89□□□□□ -2.11
NEDD4P46934 AC006026.1-201ENST00000444025 1803 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 Y_RNA.2-201ENST00000362330 96 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 RNU1-76P-201ENST00000362903 159 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 SNORA3A-201ENST00000364113 130 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 Y_RNA.474-201ENST00000384341 102 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 Y_RNA.533-201ENST00000384596 114 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 RNA5SP270-201ENST00000411361 118 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NEDD4P46934 MTATP6P23-201ENST00000440153 476 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.88□□□□□ -2.11
NEDD4P46934 AC092473.1-201ENST00000441098 221 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 HMGN2P18-201ENST00000450680 270 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 PRELID3BP1-201ENST00000457142 540 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 RPL30P10-201ENST00000488148 337 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.88□□□□□ -2.11
NEDD4P46934 RPS23P5-201ENST00000495419 428 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.88□□□□□ -2.11
NEDD4P46934 FGF7P4-201ENST00000509595 295 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 Y_RNA.670-201ENST00000516255 105 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 AC090517.1-201ENST00000569307 266 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 MIR4303-201ENST00000581299 66 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 AC104260.1-201ENST00000616660 539 ntBASIC1.88□□□□□ -2.11
NEDD4P46934 BX322639.1-202ENST00000423987 2213 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.87□□□□□ -2.11
NEDD4P46934 RNU6-457P-201ENST00000363999 107 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 Y_RNA.263-201ENST00000364659 114 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 Y_RNA.387-201ENST00000383918 102 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 U8.10-201ENST00000384260 133 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 MIR32-201ENST00000384965 70 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 MIR29C-201ENST00000385231 88 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 SNORA75.4-201ENST00000391278 119 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 BX510359.4-201ENST00000423750 193 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 USMG5P1-201ENST00000425964 177 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.87□□□□□ -2.11
NEDD4P46934 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.87□□□□□ -2.11
NEDD4P46934 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.87□□□□□ -2.11
NEDD4P46934 MIR449C-201ENST00000516047 92 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms