Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MTND3P10-201ENST00000450967 341 ntBASIC2.11□□□□□ -2.07
HADHAP40939 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
HADHAP40939 SNORA20.3-201ENST00000516880 132 ntBASIC2.11□□□□□ -2.07
HADHAP40939 RNU6-58P-201ENST00000517143 103 ntBASIC2.11□□□□□ -2.07
HADHAP40939 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HADHAP40939 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.11□□□□□ -2.07
HADHAP40939 AL773524.1-201ENST00000614065 229 ntBASIC2.11□□□□□ -2.07
HADHAP40939 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.11□□□□□ -2.07
HADHAP40939 MIR219B-201ENST00000637023 88 ntBASIC2.11□□□□□ -2.07
HADHAP40939 ZNF204P-201ENST00000416749 2397 ntBASIC2.1□□□□□ -2.07
HADHAP40939 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HADHAP40939 RNA5SP276-201ENST00000362580 94 ntBASIC2.1□□□□□ -2.07
HADHAP40939 RNU1-62P-201ENST00000362599 164 ntBASIC2.1□□□□□ -2.07
HADHAP40939 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.1□□□□□ -2.07
HADHAP40939 RNU6-541P-201ENST00000384709 110 ntBASIC2.1□□□□□ -2.07
HADHAP40939 AC138393.2-201ENST00000414742 246 ntBASIC2.1□□□□□ -2.07
HADHAP40939 AC139712.2-201ENST00000424302 339 ntBASIC2.1□□□□□ -2.07
HADHAP40939 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.1□□□□□ -2.07
HADHAP40939 Z82188.1-201ENST00000436709 154 ntBASIC2.1□□□□□ -2.07
HADHAP40939 MTCO3P8-201ENST00000453691 755 ntBASIC2.1□□□□□ -2.07
HADHAP40939 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.1□□□□□ -2.07
HADHAP40939 AC100812.1-201ENST00000607622 580 ntBASIC2.1□□□□□ -2.07
HADHAP40939 AL590240.4-201ENST00000616908 390 ntBASIC2.1□□□□□ -2.07
HADHAP40939 MIR7843-201ENST00000622274 79 ntBASIC2.1□□□□□ -2.07
HADHAP40939 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
HADHAP40939 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HADHAP40939 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.09□□□□□ -2.07
HADHAP40939 SNORD114-1-201ENST00000362705 72 ntBASIC2.09□□□□□ -2.07
HADHAP40939 SNORA48.1-201ENST00000390879 135 ntBASIC2.09□□□□□ -2.07
HADHAP40939 SNORA12.2-201ENST00000391040 156 ntBASIC2.09□□□□□ -2.07
HADHAP40939 AL356432.1-201ENST00000405809 419 ntBASIC2.09□□□□□ -2.07
HADHAP40939 Y_RNA.594-201ENST00000410373 140 ntBASIC2.09□□□□□ -2.07
HADHAP40939 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.09□□□□□ -2.07
HADHAP40939 AC244636.1-201ENST00000421152 228 ntBASIC2.09□□□□□ -2.07
HADHAP40939 Y_RNA.635-201ENST00000459041 101 ntBASIC2.09□□□□□ -2.07
HADHAP40939 RNU6-948P-201ENST00000516374 107 ntBASIC2.09□□□□□ -2.07
HADHAP40939 AP005660.1-201ENST00000522972 293 ntBASIC2.09□□□□□ -2.07
HADHAP40939 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.09□□□□□ -2.07
HADHAP40939 RRN3P3-201ENST00000549207 578 ntBASIC2.09□□□□□ -2.07
HADHAP40939 AC027288.2-201ENST00000553028 243 ntBASIC2.09□□□□□ -2.07
HADHAP40939 PISRT1.1-201ENST00000616930 107 ntBASIC2.09□□□□□ -2.07
HADHAP40939 AC098657.3-201ENST00000620434 263 ntBASIC2.09□□□□□ -2.07
HADHAP40939 AC008873.1-201ENST00000625051 138 ntBASIC2.09□□□□□ -2.07
HADHAP40939 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.09□□□□□ -2.07
HADHAP40939 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
HADHAP40939 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HADHAP40939 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HADHAP40939 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HADHAP40939 MIR340-201ENST00000362125 95 ntBASIC2.08□□□□□ -2.08
HADHAP40939 RNU6-545P-201ENST00000362681 104 ntBASIC2.08□□□□□ -2.08
HADHAP40939 Y_RNA.88-201ENST00000363029 99 ntBASIC2.08□□□□□ -2.08
HADHAP40939 RNU6-1059P-201ENST00000363752 98 ntBASIC2.08□□□□□ -2.08
HADHAP40939 SNORD114-6-201ENST00000364393 72 ntBASIC2.08□□□□□ -2.08
HADHAP40939 SNORA8-201ENST00000384574 139 ntBASIC2.08□□□□□ -2.08
HADHAP40939 MIR597-201ENST00000384968 97 ntBASIC2.08□□□□□ -2.08
HADHAP40939 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HADHAP40939 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HADHAP40939 RPL23AP7-203ENST00000449021 469 ntBASIC2.08□□□□□ -2.08
HADHAP40939 AC010531.2-201ENST00000465012 153 ntBASIC2.08□□□□□ -2.08
HADHAP40939 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.08□□□□□ -2.08
HADHAP40939 Y_RNA.706-201ENST00000516933 99 ntBASIC2.08□□□□□ -2.08
HADHAP40939 RNU6-856P-201ENST00000516959 98 ntBASIC2.08□□□□□ -2.08
HADHAP40939 SUMO2P18-201ENST00000518873 252 ntBASIC2.08□□□□□ -2.08
HADHAP40939 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.08□□□□□ -2.08
HADHAP40939 AL121579.1-201ENST00000555129 305 ntBASIC2.08□□□□□ -2.08
HADHAP40939 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.08□□□□□ -2.08
HADHAP40939 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.08□□□□□ -2.08
HADHAP40939 SNORD11B-201ENST00000607707 90 ntBASIC2.08□□□□□ -2.08
HADHAP40939 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.08□□□□□ -2.08
HADHAP40939 TPTEP1-208ENST00000636884 213 ntBASIC2.08□□□□□ -2.08
HADHAP40939 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.08□□□□□ -2.08
HADHAP40939 Y_RNA.2-201ENST00000362330 96 ntBASIC2.07□□□□□ -2.08
HADHAP40939 Y_RNA.184-201ENST00000363884 108 ntBASIC2.07□□□□□ -2.08
HADHAP40939 RNU6-1283P-201ENST00000365314 105 ntBASIC2.07□□□□□ -2.08
HADHAP40939 RNU6-975P-201ENST00000384296 105 ntBASIC2.07□□□□□ -2.08
HADHAP40939 RNU6-1235P-201ENST00000384559 107 ntBASIC2.07□□□□□ -2.08
HADHAP40939 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
HADHAP40939 RNU6-159P-201ENST00000391080 106 ntBASIC2.07□□□□□ -2.08
HADHAP40939 PDCL2P1-201ENST00000419302 352 ntBASIC2.07□□□□□ -2.08
HADHAP40939 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
HADHAP40939 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.07□□□□□ -2.08
HADHAP40939 RNU6-498P-201ENST00000459468 107 ntBASIC2.07□□□□□ -2.08
HADHAP40939 AC103851.1-201ENST00000506833 274 ntBASIC2.07□□□□□ -2.08
HADHAP40939 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.07□□□□□ -2.08
HADHAP40939 CBX3P8-201ENST00000532412 525 ntBASIC2.07□□□□□ -2.08
HADHAP40939 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.07□□□□□ -2.08
HADHAP40939 MIR5701-3-201ENST00000578890 82 ntBASIC2.07□□□□□ -2.08
HADHAP40939 MIR5701-1-201ENST00000585138 82 ntBASIC2.07□□□□□ -2.08
HADHAP40939 AC025253.1-201ENST00000613623 543 ntBASIC2.07□□□□□ -2.08
HADHAP40939 MIR5701-2-201ENST00000615634 82 ntBASIC2.07□□□□□ -2.08
HADHAP40939 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
HADHAP40939 RNA5SP138-201ENST00000365098 114 ntBASIC2.06□□□□□ -2.08
HADHAP40939 SNORD81.2-201ENST00000365153 76 ntBASIC2.06□□□□□ -2.08
HADHAP40939 RNU6-700P-201ENST00000391043 107 ntBASIC2.06□□□□□ -2.08
HADHAP40939 RNA5SP501-201ENST00000410990 112 ntBASIC2.06□□□□□ -2.08
HADHAP40939 NDUFB4P10-201ENST00000452541 359 ntBASIC2.06□□□□□ -2.08
HADHAP40939 RPL23AP42-201ENST00000471152 471 ntBASIC2.06□□□□□ -2.08
HADHAP40939 HMGN2P9-201ENST00000476875 229 ntBASIC2.06□□□□□ -2.08
HADHAP40939 Y_RNA.670-201ENST00000516255 105 ntBASIC2.06□□□□□ -2.08
HADHAP40939 Y_RNA.405-201ENST00000383979 100 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms