Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AL355796.1-201ENST00000406706 323 ntBASIC3.25□□□□□ -1.89
GDNFP39905 MIR1185-2-201ENST00000408687 86 ntBASIC3.25□□□□□ -1.89
GDNFP39905 Y_RNA.630-201ENST00000411370 108 ntBASIC3.25□□□□□ -1.89
GDNFP39905 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.25□□□□□ -1.89
GDNFP39905 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.25□□□□□ -1.89
GDNFP39905 RPL23AP7-203ENST00000449021 469 ntBASIC3.25□□□□□ -1.89
GDNFP39905 CENPBD1P1-201ENST00000464061 469 ntBASIC3.25□□□□□ -1.89
GDNFP39905 RNA5SP208-201ENST00000516156 78 ntBASIC3.25□□□□□ -1.89
GDNFP39905 RNU6-1061P-201ENST00000516530 99 ntBASIC3.25□□□□□ -1.89
GDNFP39905 Y_RNA.692-201ENST00000516627 105 ntBASIC3.25□□□□□ -1.89
GDNFP39905 NDUFB9P3-201ENST00000521269 501 ntBASIC3.25□□□□□ -1.89
GDNFP39905 YPEL5P3-201ENST00000547227 352 ntBASIC3.25□□□□□ -1.89
GDNFP39905 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.25□□□□□ -1.89
GDNFP39905 MIR3121-201ENST00000579680 77 ntBASIC3.25□□□□□ -1.89
GDNFP39905 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.25□□□□□ -1.89
GDNFP39905 AP003357.1-201ENST00000604497 148 ntBASIC3.25□□□□□ -1.89
GDNFP39905 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.25□□□□□ -1.89
GDNFP39905 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.25□□□□□ -1.89
GDNFP39905 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.24□□□□□ -1.89
GDNFP39905 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
GDNFP39905 AC010889.1-201ENST00000566193 2666 ntBASIC3.24□□□□□ -1.89
GDNFP39905 SPRR2C-201ENST00000290702 219 ntBASIC3.24□□□□□ -1.89
GDNFP39905 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
GDNFP39905 AC063976.4-201ENST00000421971 163 ntBASIC3.24□□□□□ -1.89
GDNFP39905 AC245047.4-201ENST00000433189 144 ntBASIC3.24□□□□□ -1.89
GDNFP39905 AL121890.1-201ENST00000435457 205 ntBASIC3.24□□□□□ -1.89
GDNFP39905 AL158147.1-201ENST00000443970 75 ntBASIC3.24□□□□□ -1.89
GDNFP39905 AC006539.3-201ENST00000454258 129 ntBASIC3.24□□□□□ -1.89
GDNFP39905 AC112771.1-201ENST00000463581 102 ntBASIC3.24□□□□□ -1.89
GDNFP39905 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
GDNFP39905 RNU6-168P-201ENST00000516189 101 ntBASIC3.24□□□□□ -1.89
GDNFP39905 MIR2116-201ENST00000517221 80 ntBASIC3.24□□□□□ -1.89
GDNFP39905 AC133485.4-201ENST00000561835 220 ntBASIC3.24□□□□□ -1.89
GDNFP39905 AC138907.4-201ENST00000570107 226 ntBASIC3.24□□□□□ -1.89
GDNFP39905 POLR3GP1-201ENST00000594073 261 ntBASIC3.24□□□□□ -1.89
GDNFP39905 AC006254.2-201ENST00000603259 279 ntBASIC3.24□□□□□ -1.89
GDNFP39905 RNA5SP196-201ENST00000625967 102 ntBASIC3.24□□□□□ -1.89
GDNFP39905 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
GDNFP39905 AC091152.2-201ENST00000591628 2569 ntBASIC3.24□□□□□ -1.89
GDNFP39905 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.24□□□□□ -1.89
GDNFP39905 AL672296.1-201ENST00000427780 2158 ntBASIC3.24□□□□□ -1.89
GDNFP39905 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
GDNFP39905 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
GDNFP39905 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
GDNFP39905 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.23□□□□□ -1.89
GDNFP39905 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
GDNFP39905 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
GDNFP39905 RNA5SP283-201ENST00000365604 119 ntBASIC3.23□□□□□ -1.89
GDNFP39905 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
GDNFP39905 SNORA20B-201ENST00000384220 132 ntBASIC3.23□□□□□ -1.89
GDNFP39905 MIR586-201ENST00000385035 97 ntBASIC3.23□□□□□ -1.89
GDNFP39905 MIR199A2-201ENST00000385289 110 ntBASIC3.23□□□□□ -1.89
GDNFP39905 MIR873-201ENST00000401120 77 ntBASIC3.23□□□□□ -1.89
GDNFP39905 AL139095.1-201ENST00000404326 391 ntBASIC3.23□□□□□ -1.89
GDNFP39905 MLLT10P1-201ENST00000418346 262 ntBASIC3.23□□□□□ -1.89
GDNFP39905 AC245291.1-201ENST00000419501 328 ntBASIC3.23□□□□□ -1.89
GDNFP39905 AC006989.1-201ENST00000427212 131 ntBASIC3.23□□□□□ -1.89
GDNFP39905 AL117339.2-201ENST00000430475 180 ntBASIC3.23□□□□□ -1.89
GDNFP39905 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.23□□□□□ -1.89
GDNFP39905 RBMY2UP-201ENST00000453474 324 ntBASIC3.23□□□□□ -1.89
GDNFP39905 RPL23AP54-201ENST00000495129 419 ntBASIC3.23□□□□□ -1.89
GDNFP39905 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.23□□□□□ -1.89
GDNFP39905 RAC1P2-201ENST00000511164 579 ntBASIC3.23□□□□□ -1.89
GDNFP39905 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.23□□□□□ -1.89
GDNFP39905 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.23□□□□□ -1.89
GDNFP39905 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.23□□□□□ -1.89
GDNFP39905 MIR6500-201ENST00000622700 86 ntBASIC3.23□□□□□ -1.89
GDNFP39905 MIR7153-201ENST00000637758 57 ntBASIC3.23□□□□□ -1.89
GDNFP39905 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.23□□□□□ -1.89
GDNFP39905 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GDNFP39905 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.23□□□□□ -1.89
GDNFP39905 AC007256.1-201ENST00000392253 2765 ntBASIC3.23□□□□□ -1.89
GDNFP39905 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
GDNFP39905 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
GDNFP39905 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
GDNFP39905 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
GDNFP39905 Y_RNA.114-201ENST00000363265 113 ntBASIC3.22□□□□□ -1.89
GDNFP39905 Y_RNA.280-201ENST00000364765 112 ntBASIC3.22□□□□□ -1.89
GDNFP39905 SNORA51.4-201ENST00000364993 124 ntBASIC3.22□□□□□ -1.89
GDNFP39905 Y_RNA.309-201ENST00000365046 111 ntBASIC3.22□□□□□ -1.89
GDNFP39905 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
GDNFP39905 RNU1-57P-201ENST00000384491 166 ntBASIC3.22□□□□□ -1.89
GDNFP39905 AC004975.1-201ENST00000428733 208 ntBASIC3.22□□□□□ -1.89
GDNFP39905 HMGN2P9-201ENST00000476875 229 ntBASIC3.22□□□□□ -1.89
GDNFP39905 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.22□□□□□ -1.89
GDNFP39905 PHBP14-201ENST00000512887 367 ntBASIC3.22□□□□□ -1.89
GDNFP39905 RNU6-197P-201ENST00000516680 100 ntBASIC3.22□□□□□ -1.89
GDNFP39905 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.22□□□□□ -1.89
GDNFP39905 AC007224.1-201ENST00000564410 144 ntBASIC3.22□□□□□ -1.89
GDNFP39905 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.22□□□□□ -1.89
GDNFP39905 ZYXP1-201ENST00000617638 118 ntBASIC3.22□□□□□ -1.89
GDNFP39905 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
GDNFP39905 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
GDNFP39905 AC026241.1-201ENST00000517873 2142 ntBASIC3.22□□□□□ -1.89
GDNFP39905 AC093908.1-201ENST00000623125 8092 ntBASIC3.21□□□□□ -1.89
GDNFP39905 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.21□□□□□ -1.89
GDNFP39905 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.21□□□□□ -1.9
GDNFP39905 AC138915.1-201ENST00000565427 1685 ntBASIC3.21□□□□□ -1.9
GDNFP39905 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
GDNFP39905 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms