Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 STAG3L5P-204ENST00000443759 179 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.1□□□□□ -2.43
SDC4P31431 MTCO3P10-201ENST00000455912 772 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 AC067940.1-201ENST00000458411 300 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 LINC01399-202ENST00000458450 244 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 AC010469.2-201ENST00000496412 480 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.1□□□□□ -2.43
SDC4P31431 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.1□□□□□ -2.43
SDC4P31431 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.1□□□□□ -2.43
SDC4P31431 MIR3118-1-201ENST00000581787 76 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 AC005730.3-201ENST00000583067 366 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 AC008521.1-201ENST00000587471 187 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 SEPT14P17-201ENST00000617978 177 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 AC006386.1-201ENST00000619436 415 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 SNORA43.4-201ENST00000629559 138 ntBASIC-0.1□□□□□ -2.43
SDC4P31431 MIR103A2-201ENST00000362154 78 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 RNY4P24-201ENST00000362735 96 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 SNORD114-9-201ENST00000364370 72 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 RNU4-41P-201ENST00000364426 143 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
SDC4P31431 RNU6-39P-201ENST00000384344 107 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 SNORA24.1-201ENST00000384401 135 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 MIR520F-201ENST00000384824 87 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 RNU6-57P-201ENST00000411348 103 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AL663109.1-201ENST00000411498 844 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AC004866.1-201ENST00000411748 78 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AC090960.1-201ENST00000421072 306 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.11□□□□□ -2.43
SDC4P31431 SNAP23P1-201ENST00000433229 246 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 MTATP6P9-201ENST00000515039 680 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.11□□□□□ -2.43
SDC4P31431 RNU6-863P-201ENST00000515989 104 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 SNORD111.1-201ENST00000516421 86 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.11□□□□□ -2.43
SDC4P31431 AC036111.3-201ENST00000526389 112 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AP003716.2-201ENST00000528260 108 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AC068587.4-201ENST00000533893 186 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.11□□□□□ -2.43
SDC4P31431 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.11□□□□□ -2.43
SDC4P31431 MIR5692A1-201ENST00000580523 69 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AL158042.1-201ENST00000605338 460 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 RNU6-88P-201ENST00000606801 100 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AC024060.1-201ENST00000607052 494 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AC064807.4-201ENST00000607201 407 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AC072039.2-201ENST00000608883 439 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 MIR8087-201ENST00000612745 78 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AC007014.2-201ENST00000615581 479 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AC078938.1-201ENST00000620993 318 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 AL136221.1-201ENST00000621449 509 ntBASIC-0.11□□□□□ -2.43
SDC4P31431 RNA5SP63-201ENST00000391225 112 ntBASIC-0.12□□□□□ -2.43
SDC4P31431 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.12□□□□□ -2.43
SDC4P31431 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.12□□□□□ -2.43
SDC4P31431 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.12□□□□□ -2.43
SDC4P31431 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.12□□□□□ -2.43
SDC4P31431 AC010486.2-201ENST00000505572 483 ntBASIC-0.12□□□□□ -2.43
SDC4P31431 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.12□□□□□ -2.43
SDC4P31431 RNU7-51P-201ENST00000516560 62 ntBASIC-0.12□□□□□ -2.43
SDC4P31431 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.12□□□□□ -2.43
SDC4P31431 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.12□□□□□ -2.43
SDC4P31431 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.12□□□□□ -2.43
SDC4P31431 AC022523.2-201ENST00000561045 150 ntBASIC-0.12□□□□□ -2.43
SDC4P31431 AC009712.1-201ENST00000564938 316 ntBASIC-0.12□□□□□ -2.43
SDC4P31431 MTND4LP25-201ENST00000570218 163 ntBASIC-0.12□□□□□ -2.43
SDC4P31431 AC004584.2-201ENST00000570407 410 ntBASIC-0.12□□□□□ -2.43
SDC4P31431 AL162730.1-201ENST00000605734 292 ntBASIC-0.12□□□□□ -2.43
SDC4P31431 AL139286.2-201ENST00000606838 396 ntBASIC-0.12□□□□□ -2.43
SDC4P31431 AL139022.2-201ENST00000606934 443 ntBASIC-0.12□□□□□ -2.43
SDC4P31431 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.12□□□□□ -2.43
SDC4P31431 uc_338.34-201ENST00000617467 174 ntBASIC-0.12□□□□□ -2.43
SDC4P31431 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.12□□□□□ -2.43
SDC4P31431 AC073343.1-201ENST00000328239 651 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 RNA5SP214-201ENST00000363378 118 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 SNORA42.1-201ENST00000363515 137 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 RNU6-424P-201ENST00000384367 105 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
SDC4P31431 MTND3P20-201ENST00000407663 186 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 AL354692.1-201ENST00000423044 315 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.13□□□□□ -2.43
SDC4P31431 AC073261.1-201ENST00000429409 121 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 MTND4P15-201ENST00000437913 1033 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 AC093019.1-201ENST00000443135 252 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 USP9YP29-201ENST00000445112 563 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 snoU13.6-201ENST00000458785 104 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 AC016632.1-201ENST00000503994 196 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.13□□□□□ -2.43
SDC4P31431 AC069113.3-201ENST00000521019 150 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 AF235103.2-201ENST00000525753 346 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.13□□□□□ -2.43
SDC4P31431 AL117336.2-201ENST00000602435 335 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 AC007684.1-201ENST00000609671 477 ntBASIC-0.13□□□□□ -2.43
SDC4P31431 AL359075.3-201ENST00000613288 217 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms