Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.28□□□□□ -2.04
HOXC8P31273 AC007485.1-201ENST00000616755 206 ntBASIC2.28□□□□□ -2.04
HOXC8P31273 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
HOXC8P31273 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
HOXC8P31273 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.27□□□□□ -2.05
HOXC8P31273 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HOXC8P31273 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
HOXC8P31273 RNU6-595P-201ENST00000363944 107 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 RNU6-968P-201ENST00000384076 107 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 Y_RNA.428-201ENST00000384078 102 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 SNORA40.19-201ENST00000390846 128 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 HMGB3P2-201ENST00000411913 584 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXC8P31273 AC018865.2-201ENST00000423631 129 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 MTCO3P29-201ENST00000432119 779 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXC8P31273 AC107032.1-201ENST00000485945 480 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXC8P31273 SNORA31.11-201ENST00000516528 139 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 RNA5SP137-201ENST00000516833 135 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 RNU6-667P-201ENST00000517186 102 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXC8P31273 AC007375.1-201ENST00000554513 578 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 MIR4529-201ENST00000578110 78 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 AC007229.1-201ENST00000590455 412 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 AC016925.2-201ENST00000605108 242 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 AC006157.1-201ENST00000611750 366 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 MIR1244-1-201ENST00000612829 85 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 SNORA43.4-201ENST00000629559 138 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 MIR1244-3-201ENST00000635744 85 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 MIR1244-2-201ENST00000636449 85 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 MIR1244-4-202ENST00000636813 85 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 AC233981.2-201ENST00000611524 1614 ntBASIC2.27□□□□□ -2.05
HOXC8P31273 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.26□□□□□ -2.05
HOXC8P31273 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
HOXC8P31273 Y_RNA.28-201ENST00000362554 111 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 Y_RNA.148-201ENST00000363557 117 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 RNA5SP99-201ENST00000364020 114 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 Y_RNA.202-201ENST00000364083 110 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 RNY3P11-201ENST00000364153 102 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 RNU6-1141P-201ENST00000364520 107 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 Y_RNA.252-201ENST00000364556 101 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 Y_RNA.314-201ENST00000365114 102 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 SNORA36A-201ENST00000384221 132 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HOXC8P31273 RNA5SP494-201ENST00000410653 129 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 MCFD2P1-201ENST00000417812 300 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 RPL23AP95-201ENST00000426806 265 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 AC092423.1-201ENST00000430165 186 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 AL160004.2-201ENST00000432935 350 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 Z82188.1-201ENST00000436709 154 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 GPM6BP3-201ENST00000442797 145 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXC8P31273 AC245102.2-201ENST00000448956 180 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 AL137159.1-201ENST00000452808 512 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXC8P31273 AC104564.1-201ENST00000493028 407 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 SNORD116.3-201ENST00000517176 78 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 NDUFA5P6-201ENST00000542110 379 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 SUB1P3-201ENST00000564581 315 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 AC004584.2-201ENST00000570407 410 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 MIR3136-201ENST00000583498 78 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 AL356157.2-201ENST00000605122 111 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXC8P31273 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
HOXC8P31273 MTND4P1-201ENST00000457501 1466 ntBASIC2.26□□□□□ -2.05
HOXC8P31273 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HOXC8P31273 RNU6-611P-201ENST00000384276 104 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 RNY1P14-201ENST00000384426 108 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 RNU6-1156P-201ENST00000410365 100 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 EIF1AXP1-201ENST00000419267 435 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 CYCSP49-201ENST00000420810 319 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 AC244670.1-201ENST00000436879 112 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 MTND4P19-201ENST00000446659 478 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 AL353752.1-201ENST00000454946 260 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 AC016632.1-201ENST00000503994 196 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.25□□□□□ -2.05
HOXC8P31273 RNA5SP182-201ENST00000516064 82 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 RNU6-988P-201ENST00000519081 107 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 AL590705.4-201ENST00000532209 134 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.25□□□□□ -2.05
HOXC8P31273 MIR5701-3-201ENST00000578890 82 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 MIR5701-1-201ENST00000585138 82 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.25□□□□□ -2.05
HOXC8P31273 AC083806.3-201ENST00000614016 455 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 MIR5701-2-201ENST00000615634 82 ntBASIC2.25□□□□□ -2.05
HOXC8P31273 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
HOXC8P31273 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXC8P31273 SNORA16B-201ENST00000364674 135 ntBASIC2.24□□□□□ -2.05
HOXC8P31273 SNORA33.2-201ENST00000365413 134 ntBASIC2.24□□□□□ -2.05
HOXC8P31273 RNU6-1286P-201ENST00000383871 107 ntBASIC2.24□□□□□ -2.05
HOXC8P31273 SNORA29-201ENST00000384183 140 ntBASIC2.24□□□□□ -2.05
HOXC8P31273 Y_RNA.577-201ENST00000384794 101 ntBASIC2.24□□□□□ -2.05
HOXC8P31273 RNU6-700P-201ENST00000391043 107 ntBASIC2.24□□□□□ -2.05
HOXC8P31273 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.24□□□□□ -2.05
HOXC8P31273 Y_RNA.597-201ENST00000410463 100 ntBASIC2.24□□□□□ -2.05
HOXC8P31273 AL358453.1-201ENST00000422522 250 ntBASIC2.24□□□□□ -2.05
HOXC8P31273 AC096644.2-201ENST00000429278 159 ntBASIC2.24□□□□□ -2.05
HOXC8P31273 CBX3P6-201ENST00000430257 527 ntBASIC2.24□□□□□ -2.05
HOXC8P31273 RPL23AP75-201ENST00000491601 451 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms