Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 RNU1-142P-201ENST00000516682 145 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 RNU6-323P-201ENST00000521915 107 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 AGGF1P4-201ENST00000568249 801 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 TCL6_2.1-201ENST00000615162 119 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 AC010608.3-201ENST00000625048 527 ntBASIC0.48□□□□□ -2.33
CD40LGP29965 RNU6-1127P-201ENST00000384580 107 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 SNORD41-201ENST00000386967 70 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 Y_RNA.598-201ENST00000410480 95 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 RNU6-57P-201ENST00000411348 103 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 SSR1P2-201ENST00000415208 787 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 AC016909.1-201ENST00000415916 166 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 FABP5P4-201ENST00000437203 171 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 AC079781.2-201ENST00000446424 169 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.47□□□□□ -2.33
CD40LGP29965 ZNF114P1-201ENST00000453500 292 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 RPS29P15-201ENST00000458329 171 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 RNU7-21P-201ENST00000459430 62 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.47□□□□□ -2.33
CD40LGP29965 SNORD27.1-201ENST00000516319 72 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.47□□□□□ -2.33
CD40LGP29965 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 MTATP6P3-201ENST00000581686 676 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.47□□□□□ -2.33
CD40LGP29965 AC146944.4-201ENST00000602697 718 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 AP000240.1-201ENST00000609910 452 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 SEPT14P19-203ENST00000633205 211 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 AC009541.1-201ENST00000438279 2662 ntBASIC0.47□□□□□ -2.33
CD40LGP29965 CASC19-280ENST00000642102 1351 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 MTND4P9-201ENST00000507819 1346 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 Y_RNA.226-201ENST00000364337 114 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 RNU6-1305P-201ENST00000364353 104 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 RNU6-440P-201ENST00000390882 105 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 AL355796.1-201ENST00000406706 323 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 AL035398.1-201ENST00000430869 322 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 GPR143P-201ENST00000434155 205 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 UBE2D3P4-201ENST00000441973 436 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 MTCO3P8-201ENST00000453691 755 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 RNU7-90P-201ENST00000459216 62 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 RNU7-57P-201ENST00000459540 60 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 AC113410.1-201ENST00000505029 247 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.46□□□□□ -2.34
CD40LGP29965 AC079140.5-201ENST00000507882 310 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 AC025465.4-201ENST00000513422 638 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.46□□□□□ -2.34
CD40LGP29965 AC004812.1-201ENST00000540773 146 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 AC026470.2-201ENST00000561492 181 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 AC012557.2-201ENST00000605919 418 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.46□□□□□ -2.34
CD40LGP29965 MIR7844-201ENST00000616161 122 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 AP002371.2-201ENST00000624450 503 ntBASIC0.46□□□□□ -2.34
CD40LGP29965 U3.8-201ENST00000363675 217 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 RNY4P34-201ENST00000364779 95 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 MIR1-2-201ENST00000384961 85 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 MIR660-201ENST00000385235 97 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 AL034345.1-201ENST00000407768 123 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 RNA5SP247-201ENST00000411181 105 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 RNU6-195P-201ENST00000411352 109 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.45□□□□□ -2.34
CD40LGP29965 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.45□□□□□ -2.34
CD40LGP29965 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.45□□□□□ -2.34
CD40LGP29965 AC009237.7-201ENST00000447357 229 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.45□□□□□ -2.34
CD40LGP29965 RPL39P5-202ENST00000512505 151 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 ELOCP32-201ENST00000548625 324 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 AC090049.2-201ENST00000550377 109 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 AL137100.2-201ENST00000555786 315 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 MTCO3P23-201ENST00000561363 289 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 MIR4778-201ENST00000577635 80 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 TUSC7.1-201ENST00000610969 165 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 AC073349.3-201ENST00000617616 186 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
CD40LGP29965 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
CD40LGP29965 MIR586-201ENST00000385035 97 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 MIR620-201ENST00000385232 95 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 MIR518E-201ENST00000385252 88 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 CDK8P2-201ENST00000415020 547 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 AC245047.3-201ENST00000429428 127 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.44□□□□□ -2.34
CD40LGP29965 RPEP5-201ENST00000441137 268 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 AC074290.1-201ENST00000448883 135 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 RPL39P39-201ENST00000455840 151 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 SCARNA18-201ENST00000459004 134 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.44□□□□□ -2.34
CD40LGP29965 AC016256.1-201ENST00000547971 354 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 MIR4703-201ENST00000577728 79 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 MIR4714-201ENST00000580728 77 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.44□□□□□ -2.34
CD40LGP29965 AL357312.1-201ENST00000603879 298 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 AP000907.4-201ENST00000604143 237 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 RNU6-85P-201ENST00000605989 107 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 AL359075.3-201ENST00000613288 217 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.44□□□□□ -2.34
CD40LGP29965 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
CD40LGP29965 AL442644.1-201ENST00000454390 3105 ntBASIC0.44□□□□□ -2.34
CD40LGP29965 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CD40LGP29965 MIR10B-201ENST00000385011 110 ntBASIC0.43□□□□□ -2.34
CD40LGP29965 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.43□□□□□ -2.34
CD40LGP29965 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms