Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 MRPL42P2-201ENST00000403169 426 ntBASIC0.25□□□□□ -2.37
CASP1P29466 AC004866.1-201ENST00000411748 78 ntBASIC0.25□□□□□ -2.37
CASP1P29466 AC004386.2-201ENST00000441858 148 ntBASIC0.25□□□□□ -2.37
CASP1P29466 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.25□□□□□ -2.37
CASP1P29466 AL606662.1-201ENST00000445763 553 ntBASIC0.25□□□□□ -2.37
CASP1P29466 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.25□□□□□ -2.37
CASP1P29466 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.25□□□□□ -2.37
CASP1P29466 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.25□□□□□ -2.37
CASP1P29466 MIR5006-201ENST00000583027 110 ntBASIC0.25□□□□□ -2.37
CASP1P29466 AL360219.1-201ENST00000610230 366 ntBASIC0.25□□□□□ -2.37
CASP1P29466 AL359075.3-201ENST00000613288 217 ntBASIC0.25□□□□□ -2.37
CASP1P29466 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.25□□□□□ -2.37
CASP1P29466 AC011155.2-201ENST00000623202 216 ntBASIC0.25□□□□□ -2.37
CASP1P29466 AL359697.1-201ENST00000624879 587 ntBASIC0.25□□□□□ -2.37
CASP1P29466 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.24□□□□□ -2.37
CASP1P29466 SNORA16.2-201ENST00000390991 127 ntBASIC0.24□□□□□ -2.37
CASP1P29466 RNU6-57P-201ENST00000411348 103 ntBASIC0.24□□□□□ -2.37
CASP1P29466 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.24□□□□□ -2.37
CASP1P29466 CDK8P2-201ENST00000415020 547 ntBASIC0.24□□□□□ -2.37
CASP1P29466 MTND3P17-201ENST00000416968 344 ntBASIC0.24□□□□□ -2.37
CASP1P29466 AL596276.1-201ENST00000434465 418 ntBASIC0.24□□□□□ -2.37
CASP1P29466 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.24□□□□□ -2.37
CASP1P29466 EXOSC3P1-201ENST00000448649 500 ntBASIC0.24□□□□□ -2.37
CASP1P29466 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.24□□□□□ -2.37
CASP1P29466 AC245047.8-201ENST00000456455 284 ntBASIC0.24□□□□□ -2.37
CASP1P29466 snoU13.25-201ENST00000458945 104 ntBASIC0.24□□□□□ -2.37
CASP1P29466 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.24□□□□□ -2.37
CASP1P29466 SNORA68.3-201ENST00000515906 83 ntBASIC0.24□□□□□ -2.37
CASP1P29466 SNORA70.12-201ENST00000516084 153 ntBASIC0.24□□□□□ -2.37
CASP1P29466 RNU7-128P-201ENST00000517247 62 ntBASIC0.24□□□□□ -2.37
CASP1P29466 AP002001.1-203ENST00000534002 267 ntBASIC0.24□□□□□ -2.37
CASP1P29466 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
CASP1P29466 AL357312.1-201ENST00000603879 298 ntBASIC0.24□□□□□ -2.37
CASP1P29466 TCL6_2.1-201ENST00000615162 119 ntBASIC0.24□□□□□ -2.37
CASP1P29466 AC138649.3-201ENST00000622154 254 ntBASIC0.24□□□□□ -2.37
CASP1P29466 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CASP1P29466 AP000568.1-201ENST00000282964 442 ntBASIC0.23□□□□□ -2.37
CASP1P29466 Y_RNA.116-201ENST00000363292 103 ntBASIC0.23□□□□□ -2.37
CASP1P29466 RNY1P8-201ENST00000383970 114 ntBASIC0.23□□□□□ -2.37
CASP1P29466 RNU6-42P-201ENST00000384165 107 ntBASIC0.23□□□□□ -2.37
CASP1P29466 RNU6-636P-201ENST00000384598 107 ntBASIC0.23□□□□□ -2.37
CASP1P29466 AL356583.2-201ENST00000426536 280 ntBASIC0.23□□□□□ -2.37
CASP1P29466 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.23□□□□□ -2.37
CASP1P29466 DAP3P1-201ENST00000441522 278 ntBASIC0.23□□□□□ -2.37
CASP1P29466 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.23□□□□□ -2.37
CASP1P29466 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.23□□□□□ -2.37
CASP1P29466 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
CASP1P29466 AC027419.1-201ENST00000522976 328 ntBASIC0.23□□□□□ -2.37
CASP1P29466 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.23□□□□□ -2.37
CASP1P29466 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.23□□□□□ -2.37
CASP1P29466 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.22□□□□□ -2.37
CASP1P29466 RNU5F-6P-201ENST00000362979 116 ntBASIC0.22□□□□□ -2.37
CASP1P29466 RNU6-83P-201ENST00000384568 112 ntBASIC0.22□□□□□ -2.37
CASP1P29466 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.22□□□□□ -2.37
CASP1P29466 MTCO2P23-201ENST00000425216 680 ntBASIC0.22□□□□□ -2.37
CASP1P29466 AC009237.7-201ENST00000447357 229 ntBASIC0.22□□□□□ -2.37
CASP1P29466 SNORA25.17-201ENST00000517184 124 ntBASIC0.22□□□□□ -2.37
CASP1P29466 AC025647.1-201ENST00000517879 253 ntBASIC0.22□□□□□ -2.37
CASP1P29466 AC026470.2-201ENST00000561492 181 ntBASIC0.22□□□□□ -2.37
CASP1P29466 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.22□□□□□ -2.37
CASP1P29466 AC004584.2-201ENST00000570407 410 ntBASIC0.22□□□□□ -2.37
CASP1P29466 AC004808.1-201ENST00000627671 721 ntBASIC0.22□□□□□ -2.37
CASP1P29466 RNU6-1287P-201ENST00000362914 107 ntBASIC0.21□□□□□ -2.38
CASP1P29466 RNU6-1305P-201ENST00000364353 104 ntBASIC0.21□□□□□ -2.38
CASP1P29466 RNU6-1060P-201ENST00000384664 107 ntBASIC0.21□□□□□ -2.38
CASP1P29466 MIR586-201ENST00000385035 97 ntBASIC0.21□□□□□ -2.38
CASP1P29466 SNORD89-201ENST00000390981 114 ntBASIC0.21□□□□□ -2.38
CASP1P29466 RNA5SP511-201ENST00000410487 115 ntBASIC0.21□□□□□ -2.38
CASP1P29466 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.21□□□□□ -2.38
CASP1P29466 AL445305.1-201ENST00000432577 575 ntBASIC0.21□□□□□ -2.38
CASP1P29466 AC022364.2-201ENST00000457963 554 ntBASIC0.21□□□□□ -2.38
CASP1P29466 RNU7-57P-201ENST00000459540 60 ntBASIC0.21□□□□□ -2.38
CASP1P29466 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.21□□□□□ -2.38
CASP1P29466 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.21□□□□□ -2.38
CASP1P29466 RN7SKP12-201ENST00000516275 143 ntBASIC0.21□□□□□ -2.38
CASP1P29466 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.21□□□□□ -2.38
CASP1P29466 SUB1P2-201ENST00000556401 297 ntBASIC0.21□□□□□ -2.38
CASP1P29466 AC025627.3-201ENST00000582078 182 ntBASIC0.21□□□□□ -2.38
CASP1P29466 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.21□□□□□ -2.38
CASP1P29466 AL096861.1-201ENST00000610899 123 ntBASIC0.21□□□□□ -2.38
CASP1P29466 AC138749.5-201ENST00000611461 208 ntBASIC0.21□□□□□ -2.38
CASP1P29466 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.21□□□□□ -2.38
CASP1P29466 AL391903.3-201ENST00000612158 163 ntBASIC0.21□□□□□ -2.38
CASP1P29466 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.21□□□□□ -2.38
CASP1P29466 7SK.10-201ENST00000621414 298 ntBASIC0.21□□□□□ -2.38
CASP1P29466 AC022418.1-201ENST00000624118 445 ntBASIC0.21□□□□□ -2.38
CASP1P29466 AC099654.13-201ENST00000639774 207 ntBASIC0.21□□□□□ -2.38
CASP1P29466 MTND5P16-201ENST00000460269 1703 ntBASIC0.21□□□□□ -2.38
CASP1P29466 MTND5P17-201ENST00000418405 1603 ntBASIC0.2□□□□□ -2.38
CASP1P29466 RNU6-169P-201ENST00000365336 107 ntBASIC0.2□□□□□ -2.38
CASP1P29466 SNORA2.2-201ENST00000365473 135 ntBASIC0.2□□□□□ -2.38
CASP1P29466 Y_RNA.367-201ENST00000365544 101 ntBASIC0.2□□□□□ -2.38
CASP1P29466 SNORA20.2-201ENST00000383922 131 ntBASIC0.2□□□□□ -2.38
CASP1P29466 MIR518E-201ENST00000385252 88 ntBASIC0.2□□□□□ -2.38
CASP1P29466 RPS3AP3-201ENST00000411933 242 ntBASIC0.2□□□□□ -2.38
CASP1P29466 AC244098.3-201ENST00000424803 96 ntBASIC0.2□□□□□ -2.38
CASP1P29466 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.2□□□□□ -2.38
CASP1P29466 MTCO3P8-201ENST00000453691 755 ntBASIC0.2□□□□□ -2.38
CASP1P29466 U7.7-201ENST00000459276 60 ntBASIC0.2□□□□□ -2.38
CASP1P29466 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms