Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 MTND1P2-201ENST00000430604 821 ntBASIC1.71□□□□□ -2.14
PTPN4P29074 MTND1P17-201ENST00000448961 204 ntBASIC1.71□□□□□ -2.14
PTPN4P29074 AF186996.7-201ENST00000492781 209 ntBASIC1.71□□□□□ -2.14
PTPN4P29074 MTCO2P30-201ENST00000503662 364 ntBASIC1.71□□□□□ -2.14
PTPN4P29074 AC018710.1-201ENST00000506509 158 ntBASIC1.71□□□□□ -2.14
PTPN4P29074 RNU6-566P-201ENST00000516790 107 ntBASIC1.71□□□□□ -2.14
PTPN4P29074 AC090517.1-201ENST00000569307 266 ntBASIC1.71□□□□□ -2.14
PTPN4P29074 MIR4742-201ENST00000581069 85 ntBASIC1.71□□□□□ -2.14
PTPN4P29074 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PTPN4P29074 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PTPN4P29074 Y_RNA.72-201ENST00000362894 103 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 RNU1-76P-201ENST00000362903 159 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 SNORD50.1-201ENST00000362987 71 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 RNA5SP493-201ENST00000364115 91 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 RNU6-306P-201ENST00000384617 107 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 RNU6-510P-201ENST00000391239 108 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 AL627390.1-201ENST00000396055 340 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 MIR300-201ENST00000401138 83 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 MIR320B2-201ENST00000408479 138 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 MTCO3P46-201ENST00000425787 232 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 Z82205.1-201ENST00000428456 297 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 AC108667.1-201ENST00000428618 249 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 AL353572.1-201ENST00000442490 417 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.7□□□□□ -2.14
PTPN4P29074 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.7□□□□□ -2.14
PTPN4P29074 AC007395.1-201ENST00000451333 677 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 AC079354.2-201ENST00000453523 154 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.7□□□□□ -2.14
PTPN4P29074 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.7□□□□□ -2.14
PTPN4P29074 RNU6-250P-201ENST00000516958 103 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.7□□□□□ -2.14
PTPN4P29074 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.7□□□□□ -2.14
PTPN4P29074 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.7□□□□□ -2.14
PTPN4P29074 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.7□□□□□ -2.14
PTPN4P29074 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.7□□□□□ -2.14
PTPN4P29074 AC104581.2-201ENST00000572227 430 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.7□□□□□ -2.14
PTPN4P29074 POLR3GP2-201ENST00000588366 668 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 AC124303.1-201ENST00000605703 360 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.7□□□□□ -2.14
PTPN4P29074 AC019193.3-201ENST00000609144 554 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 AL133216.2-202ENST00000634512 349 ntBASIC1.7□□□□□ -2.14
PTPN4P29074 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PTPN4P29074 MIR30A-201ENST00000385092 71 ntBASIC1.69□□□□□ -2.14
PTPN4P29074 RNU6-1093P-201ENST00000391194 107 ntBASIC1.69□□□□□ -2.14
PTPN4P29074 Y_RNA.595-201ENST00000410403 105 ntBASIC1.69□□□□□ -2.14
PTPN4P29074 RNA5SP494-201ENST00000410653 129 ntBASIC1.69□□□□□ -2.14
PTPN4P29074 RNU2-41P-201ENST00000410991 178 ntBASIC1.69□□□□□ -2.14
PTPN4P29074 NCOR1P3-201ENST00000420479 303 ntBASIC1.69□□□□□ -2.14
PTPN4P29074 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.69□□□□□ -2.14
PTPN4P29074 RN7SKP210-201ENST00000459176 261 ntBASIC1.69□□□□□ -2.14
PTPN4P29074 SNORD13-201ENST00000459299 104 ntBASIC1.69□□□□□ -2.14
PTPN4P29074 RNU7-14P-201ENST00000459331 62 ntBASIC1.69□□□□□ -2.14
PTPN4P29074 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.69□□□□□ -2.14
PTPN4P29074 Y_RNA.676-201ENST00000516393 96 ntBASIC1.69□□□□□ -2.14
PTPN4P29074 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.69□□□□□ -2.14
PTPN4P29074 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.69□□□□□ -2.14
PTPN4P29074 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.69□□□□□ -2.14
PTPN4P29074 MIR8081-201ENST00000611533 95 ntBASIC1.69□□□□□ -2.14
PTPN4P29074 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
PTPN4P29074 CASC19-280ENST00000642102 1351 ntBASIC1.69□□□□□ -2.14
PTPN4P29074 MTND3P8-201ENST00000412909 339 ntBASIC1.68□□□□□ -2.14
PTPN4P29074 AC087477.1-201ENST00000465747 340 ntBASIC1.68□□□□□ -2.14
PTPN4P29074 RPS29P11-201ENST00000496507 171 ntBASIC1.68□□□□□ -2.14
PTPN4P29074 MTND5P5-201ENST00000503764 376 ntBASIC1.68□□□□□ -2.14
PTPN4P29074 AC108729.3-201ENST00000513484 108 ntBASIC1.68□□□□□ -2.14
PTPN4P29074 RNU2-34P-201ENST00000516534 121 ntBASIC1.68□□□□□ -2.14
PTPN4P29074 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.68□□□□□ -2.14
PTPN4P29074 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.68□□□□□ -2.14
PTPN4P29074 MIR4790-201ENST00000577799 79 ntBASIC1.68□□□□□ -2.14
PTPN4P29074 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.68□□□□□ -2.14
PTPN4P29074 AC011712.1-201ENST00000588959 234 ntBASIC1.68□□□□□ -2.14
PTPN4P29074 AC103810.8-201ENST00000607347 118 ntBASIC1.68□□□□□ -2.14
PTPN4P29074 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.68□□□□□ -2.14
PTPN4P29074 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
PTPN4P29074 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
PTPN4P29074 Y_RNA.132-201ENST00000363421 102 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 SNORA17.3-201ENST00000391159 129 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 FGF7P8-201ENST00000402994 292 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 RPL23AP36-201ENST00000413895 458 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 HSPE1P21-201ENST00000438283 308 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 AC074290.1-201ENST00000448883 135 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.67□□□□□ -2.14
PTPN4P29074 AC016925.1-201ENST00000458303 298 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 RPL23AP75-201ENST00000491601 451 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.67□□□□□ -2.14
PTPN4P29074 ATP5EP1-201ENST00000510257 156 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 ACA59.1-201ENST00000515966 143 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 Y_RNA.682-201ENST00000516457 100 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 RNU6-1098P-201ENST00000516772 96 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 SUMO2P18-201ENST00000518873 252 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 DEFB131C-201ENST00000528817 165 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 CBX3P4-201ENST00000538909 354 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 MIR4498-201ENST00000577599 66 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 MIR3169-201ENST00000578032 83 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 MIR502-201ENST00000606349 86 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 SCARNA4-201ENST00000629045 128 ntBASIC1.67□□□□□ -2.14
PTPN4P29074 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.66□□□□□ -2.14
PTPN4P29074 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms