Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 SNORD42.2-201ENST00000365570 69 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 RNU6-43P-201ENST00000384302 107 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 SNORA40.6-201ENST00000391153 128 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 MIR548F5-201ENST00000408421 86 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 DAP3P1-201ENST00000441522 278 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 FO393415.2-201ENST00000480085 343 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 RPS27P26-201ENST00000494583 239 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.25□□□□□ -2.21
COL5A1P20908 RNU5F-8P-201ENST00000515941 111 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 RNU6-377P-201ENST00000515965 102 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 RNU6-911P-201ENST00000516523 104 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 SCARNA3-201ENST00000517097 143 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.25□□□□□ -2.21
COL5A1P20908 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.25□□□□□ -2.21
COL5A1P20908 IMMP1LP2-201ENST00000552954 492 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 AC093249.1-201ENST00000567049 203 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.25□□□□□ -2.21
COL5A1P20908 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.25□□□□□ -2.21
COL5A1P20908 AC124303.1-201ENST00000605703 360 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 AC134503.1-201ENST00000633048 54 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
COL5A1P20908 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.25□□□□□ -2.21
COL5A1P20908 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.24□□□□□ -2.21
COL5A1P20908 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.24□□□□□ -2.21
COL5A1P20908 RNU1-133P-201ENST00000364867 167 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 RNU6-190P-201ENST00000384154 102 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 Y_RNA.445-201ENST00000384168 102 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 RNU6-784P-201ENST00000384330 106 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 RNU6-831P-201ENST00000384548 107 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL5A1P20908 RNY4P36-201ENST00000391116 96 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 MIR548K-201ENST00000408406 116 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 RNU2-23P-201ENST00000410545 195 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 RNU6-1304P-201ENST00000411374 106 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.24□□□□□ -2.21
COL5A1P20908 PTGES3P4-201ENST00000426243 356 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.24□□□□□ -2.21
COL5A1P20908 AL512844.2-201ENST00000433990 593 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 RPS15AP5-201ENST00000436276 388 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AL583843.1-201ENST00000456070 346 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AC004223.1-201ENST00000479840 271 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AC026782.1-201ENST00000512952 449 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.24□□□□□ -2.21
COL5A1P20908 Y_RNA.691-201ENST00000516611 103 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.24□□□□□ -2.21
COL5A1P20908 TRAV32-201ENST00000553993 340 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.24□□□□□ -2.21
COL5A1P20908 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.24□□□□□ -2.21
COL5A1P20908 MIR4790-201ENST00000577799 79 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 MIR5690-201ENST00000583739 73 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 BNIP3P16-201ENST00000589779 534 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.24□□□□□ -2.21
COL5A1P20908 MIR8076-201ENST00000611401 83 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.24□□□□□ -2.21
COL5A1P20908 UCA1.1-201ENST00000620952 75 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.24□□□□□ -2.21
COL5A1P20908 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.24□□□□□ -2.21
COL5A1P20908 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL5A1P20908 Y_RNA.197-201ENST00000364004 102 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 Y_RNA.315-201ENST00000365117 102 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 RNU6-842P-201ENST00000384269 107 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 Y_RNA.473-201ENST00000384333 102 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 RNU6-19P-201ENST00000384718 107 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 MIR1285-1-201ENST00000408593 84 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 MTCO2P27-201ENST00000420740 428 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
COL5A1P20908 USP9YP30-201ENST00000430729 455 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AC005534.2-201ENST00000431047 433 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.24□□□□□ -2.21
COL5A1P20908 AL035666.1-201ENST00000446195 348 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AL031274.1-201ENST00000450334 232 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.24□□□□□ -2.21
COL5A1P20908 AC027575.1-201ENST00000481064 460 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.24□□□□□ -2.21
COL5A1P20908 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 RNU5F-2P-201ENST00000516066 82 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 RNU6-1016P-201ENST00000516689 94 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 RNU1-54P-201ENST00000517181 120 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AC109479.2-201ENST00000517842 174 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.24□□□□□ -2.21
COL5A1P20908 LINC00933-203ENST00000559812 219 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.24□□□□□ -2.21
COL5A1P20908 AC078795.3-201ENST00000602913 472 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AL133255.1-201ENST00000606374 441 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AC019193.3-201ENST00000609144 554 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 AC004852.3-201ENST00000614131 326 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.24□□□□□ -2.21
COL5A1P20908 MIR1302-1-201ENST00000637932 143 ntBASIC1.24□□□□□ -2.21
COL5A1P20908 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
COL5A1P20908 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
COL5A1P20908 HAUS6P2-201ENST00000433254 2404 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 RNU4-76P-201ENST00000364509 141 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 RNU6-790P-201ENST00000384479 105 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 Y_RNA.509-201ENST00000384506 99 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 RNU6-1009P-201ENST00000390996 107 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 MIR1302-11-201ENST00000408051 138 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 MIR1302-9-201ENST00000408365 138 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 MIR1302-10-201ENST00000408734 138 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 AC243428.1-201ENST00000421099 264 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms