Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RPL23AP7-203ENST00000449021 469 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 RNU6-717P-201ENST00000459076 104 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.1□□□□□ -2.07
CAPN3P20807 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 AC134698.4-201ENST00000523451 826 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.1□□□□□ -2.07
CAPN3P20807 AL590705.4-201ENST00000532209 134 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.1□□□□□ -2.07
CAPN3P20807 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.1□□□□□ -2.07
CAPN3P20807 AC005668.1-201ENST00000571142 476 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.1□□□□□ -2.07
CAPN3P20807 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.1□□□□□ -2.07
CAPN3P20807 WWP1P1-201ENST00000466609 2769 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 CENPCP1-201ENST00000533085 2578 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CAPN3P20807 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CAPN3P20807 Y_RNA.226-201ENST00000364337 114 ntBASIC2.09□□□□□ -2.07
CAPN3P20807 RNU6-975P-201ENST00000384296 105 ntBASIC2.09□□□□□ -2.07
CAPN3P20807 Y_RNA.505-201ENST00000384489 102 ntBASIC2.09□□□□□ -2.07
CAPN3P20807 RNU6-174P-201ENST00000410406 106 ntBASIC2.09□□□□□ -2.07
CAPN3P20807 AC074085.1-201ENST00000413598 418 ntBASIC2.09□□□□□ -2.07
CAPN3P20807 AC243428.1-201ENST00000421099 264 ntBASIC2.09□□□□□ -2.07
CAPN3P20807 AC069257.2-201ENST00000441819 155 ntBASIC2.09□□□□□ -2.07
CAPN3P20807 AC107399.1-201ENST00000451226 265 ntBASIC2.09□□□□□ -2.07
CAPN3P20807 Y_RNA.682-201ENST00000516457 100 ntBASIC2.09□□□□□ -2.07
CAPN3P20807 GNAI2P1-201ENST00000541815 315 ntBASIC2.09□□□□□ -2.07
CAPN3P20807 MIR5094-201ENST00000578766 85 ntBASIC2.09□□□□□ -2.07
CAPN3P20807 AC010928.2-201ENST00000588017 287 ntBASIC2.09□□□□□ -2.07
CAPN3P20807 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.09□□□□□ -2.07
CAPN3P20807 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CAPN3P20807 RNU1-62P-201ENST00000362599 164 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 RNU6-418P-201ENST00000384035 107 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 AL079342.1-201ENST00000401460 267 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 Y_RNA.619-201ENST00000410951 90 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.08□□□□□ -2.08
CAPN3P20807 SNORD5.1-201ENST00000458800 75 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 HMGN2P9-201ENST00000476875 229 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 AC018710.1-201ENST00000506509 158 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 AC108729.3-201ENST00000513484 108 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 AC046134.1-201ENST00000514454 666 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 SNORA25.14-201ENST00000516481 132 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 RNU6-58P-201ENST00000517143 103 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 MTND4LP26-201ENST00000518144 282 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.08□□□□□ -2.08
CAPN3P20807 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.08□□□□□ -2.08
CAPN3P20807 MIR4742-201ENST00000581069 85 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 AP000942.3-201ENST00000603702 160 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 AC010900.2-201ENST00000604508 210 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 AL353149.1-201ENST00000610667 244 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 AC008873.1-201ENST00000625051 138 ntBASIC2.08□□□□□ -2.08
CAPN3P20807 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CAPN3P20807 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.07□□□□□ -2.08
CAPN3P20807 RNA5SP160-201ENST00000364866 120 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 RNU6-17P-201ENST00000384245 107 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 RNU6-18P-201ENST00000384527 107 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 RNA5SP100-201ENST00000410903 110 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 RNA5SP59-201ENST00000410922 110 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 RPL23AP36-201ENST00000413895 458 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 RPL21P111-201ENST00000418453 477 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.07□□□□□ -2.08
CAPN3P20807 Z82188.1-201ENST00000436709 154 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.07□□□□□ -2.08
CAPN3P20807 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 FO393415.2-201ENST00000480085 343 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 MTND5P5-201ENST00000503764 376 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.07□□□□□ -2.08
CAPN3P20807 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.07□□□□□ -2.08
CAPN3P20807 RNU6-1016P-201ENST00000516689 94 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 Y_RNA.706-201ENST00000516933 99 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.07□□□□□ -2.08
CAPN3P20807 SUB1P4-201ENST00000566062 339 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 AC104581.2-201ENST00000572227 430 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 MIR3198-2-201ENST00000577868 80 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.07□□□□□ -2.08
CAPN3P20807 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 MIR7111-201ENST00000619751 72 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.07□□□□□ -2.08
CAPN3P20807 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
CAPN3P20807 SNORA72.2-201ENST00000365028 127 ntBASIC2.06□□□□□ -2.08
CAPN3P20807 MIR515-2-201ENST00000384883 83 ntBASIC2.06□□□□□ -2.08
CAPN3P20807 MIR515-1-201ENST00000384884 83 ntBASIC2.06□□□□□ -2.08
CAPN3P20807 SNORA26.9-201ENST00000391322 122 ntBASIC2.06□□□□□ -2.08
CAPN3P20807 AC008134.1-201ENST00000420943 193 ntBASIC2.06□□□□□ -2.08
CAPN3P20807 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.06□□□□□ -2.08
CAPN3P20807 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.06□□□□□ -2.08
CAPN3P20807 AC011406.1-201ENST00000512440 370 ntBASIC2.06□□□□□ -2.08
CAPN3P20807 RNU6-1053P-201ENST00000515930 101 ntBASIC2.06□□□□□ -2.08
CAPN3P20807 RNU1-117P-201ENST00000517041 158 ntBASIC2.06□□□□□ -2.08
CAPN3P20807 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.06□□□□□ -2.08
CAPN3P20807 AC100812.1-201ENST00000607622 580 ntBASIC2.06□□□□□ -2.08
CAPN3P20807 MIR219B-201ENST00000637023 88 ntBASIC2.06□□□□□ -2.08
CAPN3P20807 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CAPN3P20807 RNU6-661P-201ENST00000362409 107 ntBASIC2.05□□□□□ -2.08
CAPN3P20807 RNU6-595P-201ENST00000363944 107 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms