Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SNORA11-201ENST00000408789 128 ntBASIC3.14□□□□□ -1.91
ATF4P18848 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.14□□□□□ -1.91
ATF4P18848 AL357552.1-201ENST00000445254 415 ntBASIC3.14□□□□□ -1.91
ATF4P18848 RPS4XP2-201ENST00000458402 793 ntBASIC3.14□□□□□ -1.91
ATF4P18848 Y_RNA.641-201ENST00000459414 105 ntBASIC3.14□□□□□ -1.91
ATF4P18848 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.14□□□□□ -1.91
ATF4P18848 RNU6-856P-201ENST00000516959 98 ntBASIC3.14□□□□□ -1.91
ATF4P18848 VN1R85P-201ENST00000601587 426 ntBASIC3.14□□□□□ -1.91
ATF4P18848 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.14□□□□□ -1.91
ATF4P18848 ZYXP1-201ENST00000617638 118 ntBASIC3.14□□□□□ -1.91
ATF4P18848 SNORA27.1-201ENST00000362604 124 ntBASIC3.13□□□□□ -1.91
ATF4P18848 RNU6-200P-201ENST00000364743 107 ntBASIC3.13□□□□□ -1.91
ATF4P18848 RNU1-91P-201ENST00000364746 163 ntBASIC3.13□□□□□ -1.91
ATF4P18848 Y_RNA.456-201ENST00000384232 111 ntBASIC3.13□□□□□ -1.91
ATF4P18848 RNU6-160P-201ENST00000384591 107 ntBASIC3.13□□□□□ -1.91
ATF4P18848 MIR1298-201ENST00000408783 112 ntBASIC3.13□□□□□ -1.91
ATF4P18848 RN7SKP284-201ENST00000411002 343 ntBASIC3.13□□□□□ -1.91
ATF4P18848 RPL23AP7-203ENST00000449021 469 ntBASIC3.13□□□□□ -1.91
ATF4P18848 Y_RNA.638-201ENST00000459374 113 ntBASIC3.13□□□□□ -1.91
ATF4P18848 AP001486.1-201ENST00000463339 476 ntBASIC3.13□□□□□ -1.91
ATF4P18848 CENPBD1P1-201ENST00000464061 469 ntBASIC3.13□□□□□ -1.91
ATF4P18848 RN7SL271P-201ENST00000487601 295 ntBASIC3.13□□□□□ -1.91
ATF4P18848 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.13□□□□□ -1.91
ATF4P18848 RNU7-143P-201ENST00000516781 65 ntBASIC3.13□□□□□ -1.91
ATF4P18848 AC136628.3-201ENST00000521868 290 ntBASIC3.13□□□□□ -1.91
ATF4P18848 AC027419.1-201ENST00000522976 328 ntBASIC3.13□□□□□ -1.91
ATF4P18848 AC087441.2-201ENST00000529141 262 ntBASIC3.13□□□□□ -1.91
ATF4P18848 CYCSP26-201ENST00000534107 320 ntBASIC3.13□□□□□ -1.91
ATF4P18848 AC025627.2-201ENST00000576220 160 ntBASIC3.13□□□□□ -1.91
ATF4P18848 MIR3126-201ENST00000577443 74 ntBASIC3.13□□□□□ -1.91
ATF4P18848 AL442067.1-201ENST00000613261 223 ntBASIC3.13□□□□□ -1.91
ATF4P18848 AC073349.3-201ENST00000617616 186 ntBASIC3.13□□□□□ -1.91
ATF4P18848 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATF4P18848 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.13□□□□□ -1.91
ATF4P18848 Y_RNA.292-201ENST00000364904 97 ntBASIC3.12□□□□□ -1.91
ATF4P18848 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.12□□□□□ -1.91
ATF4P18848 BTF3P11-201ENST00000426582 477 ntBASIC3.12□□□□□ -1.91
ATF4P18848 Z98949.2-201ENST00000440996 144 ntBASIC3.12□□□□□ -1.91
ATF4P18848 AC025750.2-201ENST00000442609 450 ntBASIC3.12□□□□□ -1.91
ATF4P18848 HSPE1P13-201ENST00000451143 297 ntBASIC3.12□□□□□ -1.91
ATF4P18848 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.12□□□□□ -1.91
ATF4P18848 AC008155.2-201ENST00000464337 397 ntBASIC3.12□□□□□ -1.91
ATF4P18848 RN7SL691P-201ENST00000494487 301 ntBASIC3.12□□□□□ -1.91
ATF4P18848 SNORA31.9-201ENST00000516429 84 ntBASIC3.12□□□□□ -1.91
ATF4P18848 MIR4282-201ENST00000583613 67 ntBASIC3.12□□□□□ -1.91
ATF4P18848 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.12□□□□□ -1.91
ATF4P18848 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
ATF4P18848 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ATF4P18848 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATF4P18848 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ATF4P18848 MIR30E-201ENST00000362104 92 ntBASIC3.11□□□□□ -1.91
ATF4P18848 RNU6-1272P-201ENST00000362776 107 ntBASIC3.11□□□□□ -1.91
ATF4P18848 Y_RNA.76-201ENST00000362931 109 ntBASIC3.11□□□□□ -1.91
ATF4P18848 Y_RNA.199-201ENST00000364014 102 ntBASIC3.11□□□□□ -1.91
ATF4P18848 RNA5SP387-201ENST00000364226 106 ntBASIC3.11□□□□□ -1.91
ATF4P18848 Y_RNA.368-201ENST00000365547 113 ntBASIC3.11□□□□□ -1.91
ATF4P18848 SNORA40.19-201ENST00000390846 128 ntBASIC3.11□□□□□ -1.91
ATF4P18848 RN7SKP123-201ENST00000410732 291 ntBASIC3.11□□□□□ -1.91
ATF4P18848 AC006011.1-201ENST00000442758 349 ntBASIC3.11□□□□□ -1.91
ATF4P18848 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.11□□□□□ -1.91
ATF4P18848 COX6CP14-201ENST00000469580 174 ntBASIC3.11□□□□□ -1.91
ATF4P18848 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
ATF4P18848 RPS27P22-201ENST00000478056 241 ntBASIC3.11□□□□□ -1.91
ATF4P18848 TRBV12-2-201ENST00000489763 344 ntBASIC3.11□□□□□ -1.91
ATF4P18848 AC099522.1-202ENST00000514718 367 ntBASIC3.11□□□□□ -1.91
ATF4P18848 RNA5SP20-201ENST00000515976 84 ntBASIC3.11□□□□□ -1.91
ATF4P18848 Y_RNA.700-201ENST00000516806 100 ntBASIC3.11□□□□□ -1.91
ATF4P18848 RN7SKP209-201ENST00000516888 304 ntBASIC3.11□□□□□ -1.91
ATF4P18848 MIR5684-201ENST00000585074 65 ntBASIC3.11□□□□□ -1.91
ATF4P18848 snoU18.1-201ENST00000629629 71 ntBASIC3.11□□□□□ -1.91
ATF4P18848 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATF4P18848 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.11□□□□□ -1.91
ATF4P18848 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ATF4P18848 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
ATF4P18848 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
ATF4P18848 CENPCP1-201ENST00000533085 2578 ntBASIC3.1□□□□□ -1.91
ATF4P18848 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ATF4P18848 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ATF4P18848 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATF4P18848 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ATF4P18848 Y_RNA.83-201ENST00000363005 113 ntBASIC3.1□□□□□ -1.91
ATF4P18848 Y_RNA.287-201ENST00000364853 94 ntBASIC3.1□□□□□ -1.91
ATF4P18848 RNU6-1072P-201ENST00000384703 107 ntBASIC3.1□□□□□ -1.91
ATF4P18848 RNU6-443P-201ENST00000384780 107 ntBASIC3.1□□□□□ -1.91
ATF4P18848 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.1□□□□□ -1.91
ATF4P18848 AL139247.1-201ENST00000422768 325 ntBASIC3.1□□□□□ -1.91
ATF4P18848 RNA5SP246-201ENST00000458909 119 ntBASIC3.1□□□□□ -1.91
ATF4P18848 RNU1-131P-201ENST00000458943 161 ntBASIC3.1□□□□□ -1.91
ATF4P18848 RPS26P55-201ENST00000471178 356 ntBASIC3.1□□□□□ -1.91
ATF4P18848 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.1□□□□□ -1.91
ATF4P18848 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.1□□□□□ -1.91
ATF4P18848 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.1□□□□□ -1.91
ATF4P18848 SNORA64.4-201ENST00000516632 81 ntBASIC3.1□□□□□ -1.91
ATF4P18848 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.1□□□□□ -1.91
ATF4P18848 AP005660.1-201ENST00000522972 293 ntBASIC3.1□□□□□ -1.91
ATF4P18848 AL137100.2-201ENST00000555786 315 ntBASIC3.1□□□□□ -1.91
ATF4P18848 AC130289.1-201ENST00000577321 73 ntBASIC3.1□□□□□ -1.91
ATF4P18848 ARF4P1-201ENST00000605447 541 ntBASIC3.1□□□□□ -1.91
ATF4P18848 AL078604.3-201ENST00000615580 211 ntBASIC3.1□□□□□ -1.91
ATF4P18848 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms