Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AC092574.1-201ENST00000609771 420 ntBASIC-0.43□□□□□ -2.48
HIST1H1DP16402 AL136221.1-201ENST00000621449 509 ntBASIC-0.43□□□□□ -2.48
HIST1H1DP16402 AC006001.4-201ENST00000622243 395 ntBASIC-0.43□□□□□ -2.48
HIST1H1DP16402 MIR1-1-201ENST00000362147 71 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 RNU6-756P-201ENST00000383997 107 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 MIR549A-201ENST00000385268 96 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 MIR1197-201ENST00000408818 88 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 AL663109.1-201ENST00000411498 844 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.44□□□□□ -2.48
HIST1H1DP16402 AC079382.1-201ENST00000493346 557 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 AC016632.1-201ENST00000503994 196 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 RNU1-117P-201ENST00000517041 158 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 AC026616.1-201ENST00000523157 525 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 DEFB130C-202ENST00000530001 230 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 MIR4300-201ENST00000581016 96 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 Z99497.2-201ENST00000603634 310 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 PART1_2.1-201ENST00000612397 250 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.44□□□□□ -2.48
HIST1H1DP16402 RNY3P13-201ENST00000365542 102 ntBASIC-0.45□□□□□ -2.48
HIST1H1DP16402 MIR610-201ENST00000385139 96 ntBASIC-0.45□□□□□ -2.48
HIST1H1DP16402 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.45□□□□□ -2.48
HIST1H1DP16402 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.45□□□□□ -2.48
HIST1H1DP16402 MTND1P32-201ENST00000433043 938 ntBASIC-0.45□□□□□ -2.48
HIST1H1DP16402 SNRPGP7-201ENST00000469016 106 ntBASIC-0.45□□□□□ -2.48
HIST1H1DP16402 RNA5SP216-201ENST00000516111 123 ntBASIC-0.45□□□□□ -2.48
HIST1H1DP16402 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.45□□□□□ -2.48
HIST1H1DP16402 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.45□□□□□ -2.48
HIST1H1DP16402 MIR3612-201ENST00000579753 87 ntBASIC-0.45□□□□□ -2.48
HIST1H1DP16402 AC112187.2-201ENST00000604345 283 ntBASIC-0.45□□□□□ -2.48
HIST1H1DP16402 AC144521.1-201ENST00000607148 956 ntBASIC-0.45□□□□□ -2.48
HIST1H1DP16402 AC122133.1-201ENST00000613964 233 ntBASIC-0.45□□□□□ -2.48
HIST1H1DP16402 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.45□□□□□ -2.48
HIST1H1DP16402 RNU6-552P-201ENST00000362869 119 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 snoZ40.1-201ENST00000364540 72 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 SNORD113.3-201ENST00000364630 78 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.46□□□□□ -2.48
HIST1H1DP16402 RNU6-692P-201ENST00000384496 107 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 MIR593-201ENST00000384856 100 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 RNU6-293P-201ENST00000411259 106 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 AC019070.1-201ENST00000415008 1024 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.46□□□□□ -2.48
HIST1H1DP16402 AL606489.2-201ENST00000433886 234 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.46□□□□□ -2.48
HIST1H1DP16402 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.46□□□□□ -2.48
HIST1H1DP16402 RNU7-94P-201ENST00000459576 63 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 RNU7-128P-201ENST00000517247 62 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 DEFB131C-201ENST00000528817 165 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 MIR4743-201ENST00000584576 69 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 AC011712.1-201ENST00000588959 234 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 AL357075.2-201ENST00000614906 189 ntBASIC-0.46□□□□□ -2.48
HIST1H1DP16402 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.46□□□□□ -2.48
HIST1H1DP16402 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
HIST1H1DP16402 RNU6-621P-201ENST00000364752 109 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 MIR214-201ENST00000385214 110 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 AC016909.1-201ENST00000415916 166 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 AC106883.1-201ENST00000418805 562 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
HIST1H1DP16402 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.47□□□□□ -2.48
HIST1H1DP16402 AC005002.2-201ENST00000438228 269 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 AP000870.1-201ENST00000472927 406 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 RN7SKP164-201ENST00000516138 266 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 RNU2-10P-201ENST00000516375 211 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 RNU11-2P-201ENST00000516898 142 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.47□□□□□ -2.48
HIST1H1DP16402 RBM11P1-201ENST00000604951 799 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 AL158042.1-201ENST00000605338 460 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 MIR8076-201ENST00000611401 83 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 uc_338.16-201ENST00000621804 95 ntBASIC-0.47□□□□□ -2.48
HIST1H1DP16402 SNORA9.1-201ENST00000362412 131 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 SNORA25.3-201ENST00000363205 127 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 U8.16-201ENST00000391279 133 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 SNORA75.6-201ENST00000391318 127 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 PCNPP3-201ENST00000393579 471 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 MIR208B-201ENST00000401172 77 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 RPS3AP3-201ENST00000411933 242 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.48□□□□□ -2.49
HIST1H1DP16402 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.48□□□□□ -2.49
HIST1H1DP16402 AL590632.1-201ENST00000424289 371 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.48□□□□□ -2.49
HIST1H1DP16402 CALM2P4-201ENST00000430810 426 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 MTND4P15-201ENST00000437913 1033 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 AC074290.1-201ENST00000448883 135 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 AC093850.1-201ENST00000454121 251 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 MTND2P30-201ENST00000456663 382 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 AC092436.3-201ENST00000511788 257 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
HIST1H1DP16402 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.48□□□□□ -2.49
HIST1H1DP16402 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.48□□□□□ -2.49
HIST1H1DP16402 AP002782.1-201ENST00000623107 614 ntBASIC-0.48□□□□□ -2.49
HIST1H1DP16402 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.48□□□□□ -2.49
HIST1H1DP16402 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.48□□□□□ -2.49
HIST1H1DP16402 RNU6-369P-201ENST00000362515 102 ntBASIC-0.49□□□□□ -2.49
HIST1H1DP16402 RNA5SP325-201ENST00000363756 130 ntBASIC-0.49□□□□□ -2.49
HIST1H1DP16402 RNU6-371P-201ENST00000364283 108 ntBASIC-0.49□□□□□ -2.49
HIST1H1DP16402 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.49□□□□□ -2.49
HIST1H1DP16402 MIR643-201ENST00000385267 97 ntBASIC-0.49□□□□□ -2.49
HIST1H1DP16402 MIR548H2-201ENST00000408874 88 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms