Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNU6-1012P-201ENST00000516606 109 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 Y_RNA.713-201ENST00000517013 96 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 CYCSP23-201ENST00000519781 313 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 AL117187.1-201ENST00000555482 181 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
HLA-DOBP13765 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
HLA-DOBP13765 U4.3-201ENST00000621047 82 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 U6.92-201ENST00000636464 89 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DOBP13765 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DOBP13765 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HLA-DOBP13765 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.18□□□□□ -2.06
HLA-DOBP13765 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DOBP13765 RNA5SP361-201ENST00000362686 118 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 Y_RNA.179-201ENST00000363844 90 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 RNU6-1145P-201ENST00000384246 107 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 MIR329-1-201ENST00000385028 80 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HLA-DOBP13765 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HLA-DOBP13765 MIR1294-201ENST00000408503 142 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 MIR548F4-201ENST00000408515 105 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 AC009963.1-201ENST00000417265 157 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 DPH3P2-201ENST00000422618 250 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 AL358176.2-201ENST00000425769 204 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 AC027124.2-201ENST00000428249 105 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DOBP13765 AC073910.1-201ENST00000445047 438 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 FCF1P4-201ENST00000448326 183 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 AC010469.2-201ENST00000496412 480 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 Y_RNA.683-201ENST00000516508 93 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 RNU6-1046P-201ENST00000516538 107 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 SNORA31.15-201ENST00000516771 132 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 SNORA48.11-201ENST00000517015 89 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DOBP13765 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DOBP13765 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.17□□□□□ -2.06
HLA-DOBP13765 AC010205.1-201ENST00000616668 449 ntBASIC2.17□□□□□ -2.06
HLA-DOBP13765 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DOBP13765 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DOBP13765 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DOBP13765 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DOBP13765 MIR21-201ENST00000362134 72 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 RNU6-944P-201ENST00000364023 107 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 Y_RNA.276-201ENST00000364732 109 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 SNORA18.2-201ENST00000383865 132 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 RNU6-26P-201ENST00000383985 107 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 RNU6-793P-201ENST00000384233 104 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 Y_RNA.471-201ENST00000384312 102 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 RNU6-1105P-201ENST00000384774 107 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 MIR549A-201ENST00000385268 96 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 AL359511.1-201ENST00000402970 211 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 Y_RNA.595-201ENST00000410403 105 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 SNORD12B-201ENST00000410433 91 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 AC003685.2-201ENST00000422795 395 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DOBP13765 AC092427.1-202ENST00000430569 476 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DOBP13765 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DOBP13765 AL445687.1-201ENST00000439946 251 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 RPEP5-201ENST00000441137 268 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 AC004386.2-201ENST00000441858 148 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 AC104389.3-201ENST00000445629 235 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 AC009237.7-201ENST00000447357 229 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 AC067942.3-201ENST00000512025 362 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 RNU6-344P-201ENST00000516635 111 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 AC131281.1-201ENST00000522984 164 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.16□□□□□ -2.06
HLA-DOBP13765 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DOBP13765 PRR13P7-201ENST00000605538 430 ntBASIC2.16□□□□□ -2.06
HLA-DOBP13765 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HLA-DOBP13765 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DOBP13765 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
HLA-DOBP13765 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DOBP13765 MTND5P35-201ENST00000557537 1720 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DOBP13765 MIR6073-201ENST00000352083 89 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 RNU1-51P-201ENST00000365345 176 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 Y_RNA.458-201ENST00000384240 102 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 MRPL35P1-201ENST00000404272 572 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DOBP13765 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DOBP13765 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DOBP13765 MTND3P2-201ENST00000438452 342 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DOBP13765 HMGN1P10-201ENST00000474557 553 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 AC091179.3-201ENST00000474761 144 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 AC010655.3-201ENST00000478818 450 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DOBP13765 MRPS35P2-201ENST00000508242 191 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 AC026436.1-201ENST00000510537 270 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 RNU2-44P-201ENST00000516795 194 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 DEFB131C-201ENST00000528817 165 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DOBP13765 AC090616.3-201ENST00000582184 217 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 MIR5006-201ENST00000583027 110 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 Y_RNA.772-201ENST00000606692 102 ntBASIC2.15□□□□□ -2.07
HLA-DOBP13765 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HLA-DOBP13765 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DOBP13765 AC007336.1-201ENST00000576365 3828 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms