Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-1.41□□□□□ -2.63
VCANP13611 RPL39P38-201ENST00000467018 153 ntBASIC-1.41□□□□□ -2.63
VCANP13611 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.41□□□□□ -2.63
VCANP13611 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-1.41□□□□□ -2.63
VCANP13611 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-1.41□□□□□ -2.63
VCANP13611 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-1.41□□□□□ -2.63
VCANP13611 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.41□□□□□ -2.64
VCANP13611 AC006380.1-201ENST00000603598 186 ntBASIC-1.41□□□□□ -2.64
VCANP13611 Z99289.3-201ENST00000605586 594 ntBASIC-1.41□□□□□ -2.64
VCANP13611 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.41□□□□□ -2.64
VCANP13611 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.41□□□□□ -2.64
VCANP13611 AL353997.1-201ENST00000432936 108 ntBASIC-1.41□□□□□ -2.64
VCANP13611 U8.6-201ENST00000364939 135 ntBASIC-1.42□□□□□ -2.64
VCANP13611 RNU6-947P-201ENST00000516264 106 ntBASIC-1.42□□□□□ -2.64
VCANP13611 RNU6-412P-201ENST00000516434 106 ntBASIC-1.42□□□□□ -2.64
VCANP13611 RNU6-922P-201ENST00000516753 99 ntBASIC-1.42□□□□□ -2.64
VCANP13611 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.42□□□□□ -2.64
VCANP13611 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
VCANP13611 RNU4-7P-201ENST00000364758 141 ntBASIC-1.42□□□□□ -2.64
VCANP13611 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-1.42□□□□□ -2.64
VCANP13611 RPS23P5-201ENST00000495419 428 ntBASIC-1.42□□□□□ -2.64
VCANP13611 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-1.42□□□□□ -2.64
VCANP13611 MIR4300-201ENST00000581016 96 ntBASIC-1.42□□□□□ -2.64
VCANP13611 MIR6851-201ENST00000617060 67 ntBASIC-1.42□□□□□ -2.64
VCANP13611 RNU6-270P-201ENST00000364131 105 ntBASIC-1.42□□□□□ -2.64
VCANP13611 RNA5SP86-201ENST00000390869 98 ntBASIC-1.42□□□□□ -2.64
VCANP13611 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC-1.42□□□□□ -2.64
VCANP13611 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.42□□□□□ -2.64
VCANP13611 AC079140.3-201ENST00000511111 550 ntBASIC-1.42□□□□□ -2.64
VCANP13611 FGF7P1-201ENST00000582820 288 ntBASIC-1.42□□□□□ -2.64
VCANP13611 RNU6-91P-201ENST00000607774 107 ntBASIC-1.42□□□□□ -2.64
VCANP13611 FER-210ENST00000628534 558 ntTSL 5 BASIC-1.42□□□□□ -2.64
VCANP13611 MRPS10P2-201ENST00000431226 381 ntBASIC-1.43□□□□□ -2.64
VCANP13611 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.43□□□□□ -2.64
VCANP13611 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.43□□□□□ -2.64
VCANP13611 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-1.43□□□□□ -2.64
VCANP13611 MIR520G-201ENST00000385064 90 ntBASIC-1.43□□□□□ -2.64
VCANP13611 MIR520H-201ENST00000385126 88 ntBASIC-1.43□□□□□ -2.64
VCANP13611 MIR1302-8-201ENST00000408342 128 ntBASIC-1.43□□□□□ -2.64
VCANP13611 RNU6-994P-201ENST00000410507 111 ntBASIC-1.43□□□□□ -2.64
VCANP13611 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-1.43□□□□□ -2.64
VCANP13611 AC069271.1-201ENST00000445577 156 ntBASIC-1.43□□□□□ -2.64
VCANP13611 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.43□□□□□ -2.64
VCANP13611 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-1.43□□□□□ -2.64
VCANP13611 AC022784.5-201ENST00000522241 437 ntBASIC-1.43□□□□□ -2.64
VCANP13611 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.43□□□□□ -2.64
VCANP13611 AC007349.4-201ENST00000608114 532 ntBASIC-1.43□□□□□ -2.64
VCANP13611 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.44□□□□□ -2.64
VCANP13611 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.44□□□□□ -2.64
VCANP13611 MIR1827-201ENST00000408549 66 ntBASIC-1.44□□□□□ -2.64
VCANP13611 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.44□□□□□ -2.64
VCANP13611 AKIRIN2P1-201ENST00000505898 352 ntBASIC-1.44□□□□□ -2.64
VCANP13611 AC108019.1-201ENST00000512540 175 ntBASIC-1.44□□□□□ -2.64
VCANP13611 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.44□□□□□ -2.64
VCANP13611 RNU6-23P-201ENST00000363283 107 ntBASIC-1.44□□□□□ -2.64
VCANP13611 SNRPEP8-201ENST00000442866 260 ntBASIC-1.44□□□□□ -2.64
VCANP13611 MTND1P31-201ENST00000449206 961 ntBASIC-1.44□□□□□ -2.64
VCANP13611 RPL21P9-201ENST00000556149 474 ntBASIC-1.44□□□□□ -2.64
VCANP13611 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.44□□□□□ -2.64
VCANP13611 MIR6079-201ENST00000635807 62 ntBASIC-1.44□□□□□ -2.64
VCANP13611 RNY4P16-201ENST00000364768 94 ntBASIC-1.45□□□□□ -2.64
VCANP13611 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.45□□□□□ -2.64
VCANP13611 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.45□□□□□ -2.64
VCANP13611 RNU6-1256P-201ENST00000516539 103 ntBASIC-1.45□□□□□ -2.64
VCANP13611 RNU4-83P-201ENST00000410863 133 ntBASIC-1.45□□□□□ -2.64
VCANP13611 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.45□□□□□ -2.64
VCANP13611 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.45□□□□□ -2.64
VCANP13611 MTCO1P19-201ENST00000443487 500 ntBASIC-1.45□□□□□ -2.64
VCANP13611 AP000533.3-201ENST00000447704 118 ntBASIC-1.45□□□□□ -2.64
VCANP13611 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.45□□□□□ -2.64
VCANP13611 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.45□□□□□ -2.64
VCANP13611 SNORD115-27-201ENST00000364430 82 ntBASIC-1.45□□□□□ -2.64
VCANP13611 AL162725.1-201ENST00000435405 301 ntBASIC-1.45□□□□□ -2.64
VCANP13611 TRBV8-1-201ENST00000481590 279 ntBASIC-1.45□□□□□ -2.64
VCANP13611 RNU6-94P-201ENST00000607728 107 ntBASIC-1.45□□□□□ -2.64
VCANP13611 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-1.46□□□□□ -2.64
VCANP13611 AP002826.1-201ENST00000608835 315 ntBASIC-1.46□□□□□ -2.64
VCANP13611 MIR6507-201ENST00000613630 70 ntBASIC-1.46□□□□□ -2.64
VCANP13611 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-1.46□□□□□ -2.64
VCANP13611 MTCYBP40-201ENST00000509390 1135 ntBASIC-1.46□□□□□ -2.64
VCANP13611 SMURF2P1-201ENST00000514992 481 ntBASIC-1.46□□□□□ -2.64
VCANP13611 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.46□□□□□ -2.64
VCANP13611 AL442163.3-201ENST00000554110 156 ntBASIC-1.46□□□□□ -2.64
VCANP13611 MIR6864-201ENST00000617935 70 ntBASIC-1.46□□□□□ -2.64
VCANP13611 RNU6-704P-201ENST00000364162 103 ntBASIC-1.47□□□□□ -2.64
VCANP13611 RNU6-901P-201ENST00000384593 106 ntBASIC-1.47□□□□□ -2.64
VCANP13611 MIR548B-201ENST00000385247 97 ntBASIC-1.47□□□□□ -2.64
VCANP13611 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-1.47□□□□□ -2.64
VCANP13611 RNY3P9-201ENST00000384727 106 ntBASIC-1.47□□□□□ -2.64
VCANP13611 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.47□□□□□ -2.64
VCANP13611 MTCYBP42-201ENST00000444653 1130 ntBASIC-1.47□□□□□ -2.64
VCANP13611 OR6C5P-201ENST00000452388 923 ntBASIC-1.47□□□□□ -2.64
VCANP13611 AC099786.3-201ENST00000565735 1410 ntBASIC-1.47□□□□□ -2.64
VCANP13611 ZNF849P-201ENST00000594711 1566 ntBASIC-1.47□□□□□ -2.64
VCANP13611 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.47□□□□□ -2.65
VCANP13611 COX6CP10-201ENST00000416832 224 ntBASIC-1.47□□□□□ -2.65
VCANP13611 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-1.47□□□□□ -2.65
VCANP13611 MIR3925-201ENST00000584674 77 ntBASIC-1.47□□□□□ -2.65
VCANP13611 AC005332.6-201ENST00000613178 446 ntBASIC-1.47□□□□□ -2.65
VCANP13611 RNU6-486P-201ENST00000363116 107 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms