Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RNU6-1301P-201ENST00000362724 104 ntBASIC2.24□□□□□ -2.05
CDH1P12830 SNORD14.1-201ENST00000365609 90 ntBASIC2.24□□□□□ -2.05
CDH1P12830 Y_RNA.389-201ENST00000383924 113 ntBASIC2.24□□□□□ -2.05
CDH1P12830 MIR628-201ENST00000385229 95 ntBASIC2.24□□□□□ -2.05
CDH1P12830 MIR549A-201ENST00000385268 96 ntBASIC2.24□□□□□ -2.05
CDH1P12830 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.24□□□□□ -2.05
CDH1P12830 AL445305.1-201ENST00000432577 575 ntBASIC2.24□□□□□ -2.05
CDH1P12830 AC096638.1-201ENST00000444678 216 ntBASIC2.24□□□□□ -2.05
CDH1P12830 MTND5P22-201ENST00000458380 195 ntBASIC2.24□□□□□ -2.05
CDH1P12830 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.24□□□□□ -2.05
CDH1P12830 UBE2DNL-203ENST00000474922 222 ntBASIC2.24□□□□□ -2.05
CDH1P12830 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.24□□□□□ -2.05
CDH1P12830 RNU6-1198P-201ENST00000516904 67 ntBASIC2.24□□□□□ -2.05
CDH1P12830 Y_RNA.721-201ENST00000517207 102 ntBASIC2.24□□□□□ -2.05
CDH1P12830 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.24□□□□□ -2.05
CDH1P12830 AC022616.4-201ENST00000522985 181 ntBASIC2.24□□□□□ -2.05
CDH1P12830 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.24□□□□□ -2.05
CDH1P12830 AC040926.1-201ENST00000530195 238 ntBASIC2.24□□□□□ -2.05
CDH1P12830 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH1P12830 EIF4A1P12-201ENST00000551910 141 ntBASIC2.24□□□□□ -2.05
CDH1P12830 AL442163.3-201ENST00000554110 156 ntBASIC2.24□□□□□ -2.05
CDH1P12830 AC125232.2-201ENST00000592457 143 ntBASIC2.24□□□□□ -2.05
CDH1P12830 AL138963.2-201ENST00000605137 226 ntBASIC2.24□□□□□ -2.05
CDH1P12830 AL078596.1-201ENST00000624856 447 ntBASIC2.24□□□□□ -2.05
CDH1P12830 IGHVIII-44-202ENST00000636235 289 ntBASIC2.24□□□□□ -2.05
CDH1P12830 Y_RNA.153-201ENST00000363615 91 ntBASIC2.23□□□□□ -2.05
CDH1P12830 RNU6-461P-201ENST00000364195 107 ntBASIC2.23□□□□□ -2.05
CDH1P12830 Y_RNA.424-201ENST00000384063 103 ntBASIC2.23□□□□□ -2.05
CDH1P12830 RNU6-281P-201ENST00000384212 103 ntBASIC2.23□□□□□ -2.05
CDH1P12830 RNY3P4-201ENST00000384428 101 ntBASIC2.23□□□□□ -2.05
CDH1P12830 SNORA51.11-201ENST00000384442 131 ntBASIC2.23□□□□□ -2.05
CDH1P12830 SNORA67.4-201ENST00000384688 142 ntBASIC2.23□□□□□ -2.05
CDH1P12830 MIR524-201ENST00000385242 87 ntBASIC2.23□□□□□ -2.05
CDH1P12830 HMGB3P2-201ENST00000411913 584 ntBASIC2.23□□□□□ -2.05
CDH1P12830 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.23□□□□□ -2.05
CDH1P12830 MTCO3P19-201ENST00000415864 321 ntBASIC2.23□□□□□ -2.05
CDH1P12830 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH1P12830 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH1P12830 U8.20-201ENST00000459445 131 ntBASIC2.23□□□□□ -2.05
CDH1P12830 AC080013.2-201ENST00000460866 323 ntBASIC2.23□□□□□ -2.05
CDH1P12830 AC090515.1-201ENST00000465295 476 ntBASIC2.23□□□□□ -2.05
CDH1P12830 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH1P12830 RNA5SP54-201ENST00000516951 92 ntBASIC2.23□□□□□ -2.05
CDH1P12830 AC091144.1-201ENST00000519573 138 ntBASIC2.23□□□□□ -2.05
CDH1P12830 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.23□□□□□ -2.05
CDH1P12830 COX6CP5-201ENST00000527162 228 ntBASIC2.23□□□□□ -2.05
CDH1P12830 MIR5694-201ENST00000581190 76 ntBASIC2.23□□□□□ -2.05
CDH1P12830 AC124312.5-201ENST00000604451 268 ntBASIC2.23□□□□□ -2.05
CDH1P12830 AC069294.1-201ENST00000608397 350 ntBASIC2.23□□□□□ -2.05
CDH1P12830 BX322639.1-202ENST00000423987 2213 ntBASIC2.23□□□□□ -2.05
CDH1P12830 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CDH1P12830 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.23□□□□□ -2.05
CDH1P12830 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
CDH1P12830 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDH1P12830 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH1P12830 MIR449A-201ENST00000362113 91 ntBASIC2.22□□□□□ -2.05
CDH1P12830 RNU4-82P-201ENST00000362443 140 ntBASIC2.22□□□□□ -2.05
CDH1P12830 Y_RNA.27-201ENST00000362540 103 ntBASIC2.22□□□□□ -2.05
CDH1P12830 U3.9-201ENST00000363823 204 ntBASIC2.22□□□□□ -2.05
CDH1P12830 RNU6-873P-201ENST00000363833 107 ntBASIC2.22□□□□□ -2.05
CDH1P12830 SET-203ENST00000372688 801 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH1P12830 Y_RNA.459-201ENST00000384251 102 ntBASIC2.22□□□□□ -2.05
CDH1P12830 RNU6-318P-201ENST00000384283 103 ntBASIC2.22□□□□□ -2.05
CDH1P12830 SNORA12-201ENST00000391162 147 ntBASIC2.22□□□□□ -2.05
CDH1P12830 MIR548F4-201ENST00000408515 105 ntBASIC2.22□□□□□ -2.05
CDH1P12830 RNU6-101P-201ENST00000410323 104 ntBASIC2.22□□□□□ -2.05
CDH1P12830 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH1P12830 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH1P12830 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH1P12830 MTCO3P8-201ENST00000453691 755 ntBASIC2.22□□□□□ -2.05
CDH1P12830 AC010469.2-201ENST00000496412 480 ntBASIC2.22□□□□□ -2.05
CDH1P12830 RNA5SP281-201ENST00000516504 135 ntBASIC2.22□□□□□ -2.05
CDH1P12830 Y_RNA.715-201ENST00000517082 110 ntBASIC2.22□□□□□ -2.05
CDH1P12830 AC022868.1-201ENST00000517767 391 ntBASIC2.22□□□□□ -2.05
CDH1P12830 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH1P12830 MIR5695-201ENST00000579717 85 ntBASIC2.22□□□□□ -2.05
CDH1P12830 AL162730.1-201ENST00000605734 292 ntBASIC2.22□□□□□ -2.05
CDH1P12830 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.22□□□□□ -2.05
CDH1P12830 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH1P12830 ZNF204P-201ENST00000416749 2397 ntBASIC2.22□□□□□ -2.05
CDH1P12830 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDH1P12830 RNA5SP361-201ENST00000362686 118 ntBASIC2.21□□□□□ -2.06
CDH1P12830 SNORD32B-201ENST00000364460 84 ntBASIC2.21□□□□□ -2.06
CDH1P12830 RNU6-1274P-201ENST00000384557 107 ntBASIC2.21□□□□□ -2.06
CDH1P12830 MIR29B2-201ENST00000385055 81 ntBASIC2.21□□□□□ -2.06
CDH1P12830 RNU6-220P-201ENST00000390919 107 ntBASIC2.21□□□□□ -2.06
CDH1P12830 MIR1252-201ENST00000408861 65 ntBASIC2.21□□□□□ -2.06
CDH1P12830 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH1P12830 AL358176.2-201ENST00000425769 204 ntBASIC2.21□□□□□ -2.06
CDH1P12830 AC079804.2-201ENST00000490376 200 ntBASIC2.21□□□□□ -2.06
CDH1P12830 AC023141.11-201ENST00000508864 202 ntBASIC2.21□□□□□ -2.06
CDH1P12830 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.21□□□□□ -2.06
CDH1P12830 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.21□□□□□ -2.06
CDH1P12830 DEFB131C-201ENST00000528817 165 ntBASIC2.21□□□□□ -2.06
CDH1P12830 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CDH1P12830 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH1P12830 AC090616.3-201ENST00000582184 217 ntBASIC2.21□□□□□ -2.06
CDH1P12830 MIR5007-201ENST00000583098 95 ntBASIC2.21□□□□□ -2.06
CDH1P12830 AL670379.2-201ENST00000604983 252 ntBASIC2.21□□□□□ -2.06
CDH1P12830 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms