Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.98□□□□□ -2.25
COL11A1P12107 RPL9P9-202ENST00000466501 579 ntBASIC0.98□□□□□ -2.25
COL11A1P12107 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.98□□□□□ -2.25
COL11A1P12107 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.98□□□□□ -2.25
COL11A1P12107 AC008834.1-201ENST00000511612 175 ntBASIC0.98□□□□□ -2.25
COL11A1P12107 AC011352.1-201ENST00000512300 793 ntBASIC0.98□□□□□ -2.25
COL11A1P12107 RNU6-566P-201ENST00000516790 107 ntBASIC0.98□□□□□ -2.25
COL11A1P12107 AC109635.3-201ENST00000529536 185 ntBASIC0.98□□□□□ -2.25
COL11A1P12107 AC103996.1-201ENST00000555468 102 ntBASIC0.98□□□□□ -2.25
COL11A1P12107 AC021231.3-201ENST00000558497 370 ntBASIC0.98□□□□□ -2.25
COL11A1P12107 MIR5583-1-201ENST00000580941 59 ntBASIC0.98□□□□□ -2.25
COL11A1P12107 BNIP3P16-201ENST00000589779 534 ntBASIC0.98□□□□□ -2.25
COL11A1P12107 AP003465.2-201ENST00000602571 373 ntBASIC0.98□□□□□ -2.25
COL11A1P12107 AC104458.1-201ENST00000608243 463 ntBASIC0.98□□□□□ -2.25
COL11A1P12107 AC092794.1-201ENST00000612734 582 ntBASIC0.98□□□□□ -2.25
COL11A1P12107 FER-210ENST00000628534 558 ntTSL 5 BASIC0.98□□□□□ -2.25
COL11A1P12107 MIR3529-201ENST00000637713 78 ntBASIC0.98□□□□□ -2.25
COL11A1P12107 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.97□□□□□ -2.25
COL11A1P12107 Y_RNA.2-201ENST00000362330 96 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 snoU2_19.1-201ENST00000362361 80 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 Y_RNA.231-201ENST00000364358 102 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 RNU6-716P-201ENST00000365621 103 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 RNU6-933P-201ENST00000384424 107 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 RNU6-45P-201ENST00000384471 107 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.97□□□□□ -2.25
COL11A1P12107 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.97□□□□□ -2.25
COL11A1P12107 RPL23AP95-201ENST00000426806 265 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.97□□□□□ -2.25
COL11A1P12107 MTCO2P3-201ENST00000442543 421 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
COL11A1P12107 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.97□□□□□ -2.25
COL11A1P12107 RNU7-167P-201ENST00000459160 62 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 RNU7-180P-201ENST00000459240 63 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.97□□□□□ -2.25
COL11A1P12107 SNORA4.4-201ENST00000515921 135 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 RNU6-1281P-201ENST00000516223 105 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 RNU6-1038P-201ENST00000516516 104 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 RNU6-1332P-201ENST00000516666 104 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 RN7SKP256-201ENST00000517201 314 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.97□□□□□ -2.25
COL11A1P12107 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.97□□□□□ -2.25
COL11A1P12107 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.97□□□□□ -2.25
COL11A1P12107 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.97□□□□□ -2.25
COL11A1P12107 AC104576.1-201ENST00000524225 88 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.97□□□□□ -2.25
COL11A1P12107 AL118558.2-201ENST00000556294 238 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 AC109446.1-201ENST00000566172 220 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 AC093249.1-201ENST00000567049 203 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 AL512605.2-201ENST00000592972 256 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 AC064836.2-201ENST00000609491 462 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.97□□□□□ -2.25
COL11A1P12107 Y_RNA.89-201ENST00000363031 102 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 RNU6-944P-201ENST00000364023 107 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 RNU4-56P-201ENST00000364700 142 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 RNU6-715P-201ENST00000365204 103 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 RNU4-12P-201ENST00000365233 139 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 Y_RNA.373-201ENST00000365600 103 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 RNU6-692P-201ENST00000384496 107 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AC009310.1-201ENST00000414414 451 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.96□□□□□ -2.26
COL11A1P12107 CYP2C59P-201ENST00000457790 269 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 RPS29P27-201ENST00000463711 170 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 RNU6-718P-201ENST00000516166 105 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AC109479.2-201ENST00000517842 174 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 IMMP1LP2-201ENST00000552954 492 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.96□□□□□ -2.26
COL11A1P12107 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.96□□□□□ -2.26
COL11A1P12107 FGF7P1-201ENST00000582820 288 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.96□□□□□ -2.26
COL11A1P12107 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AC016925.2-201ENST00000605108 242 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AC022202.1-201ENST00000613515 211 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AC090617.10-201ENST00000624308 134 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 SNORD56.1-201ENST00000362913 68 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 Y_RNA.100-201ENST00000363141 102 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 Y_RNA.258-201ENST00000364613 105 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 Y_RNA.372-201ENST00000365599 102 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 RNU6-142P-201ENST00000384019 107 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 SNORA32.2-201ENST00000384049 122 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 Y_RNA.505-201ENST00000384489 102 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 SNORA12-201ENST00000391162 147 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 EIF4E2P1-201ENST00000393781 255 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 MIR450B-201ENST00000401182 78 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 MIR548F1-201ENST00000408667 84 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 RNA5SP118-201ENST00000410385 109 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.96□□□□□ -2.26
COL11A1P12107 EIF1P1-201ENST00000421436 341 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.96□□□□□ -2.26
COL11A1P12107 AC244670.1-201ENST00000436879 112 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AL161651.1-201ENST00000440882 223 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.96□□□□□ -2.26
COL11A1P12107 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.96□□□□□ -2.26
COL11A1P12107 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AL353752.1-201ENST00000454946 260 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 RNU6-329P-201ENST00000459618 107 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 CCDC34P1-201ENST00000507441 517 ntBASIC0.96□□□□□ -2.26
COL11A1P12107 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.96□□□□□ -2.26
COL11A1P12107 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.96□□□□□ -2.26
COL11A1P12107 Y_RNA.704-201ENST00000516851 102 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms