Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 MT-TL1-201ENST00000386347 75 ntBASIC1.81□□□□□ -2.12
KRT3P12035 RNA5SP465-201ENST00000391195 109 ntBASIC1.81□□□□□ -2.12
KRT3P12035 RNA5SP212-201ENST00000391223 107 ntBASIC1.81□□□□□ -2.12
KRT3P12035 MIR1283-2-201ENST00000408621 87 ntBASIC1.81□□□□□ -2.12
KRT3P12035 EIF4EP2-201ENST00000422816 654 ntBASIC1.81□□□□□ -2.12
KRT3P12035 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.81□□□□□ -2.12
KRT3P12035 FGF7P6-202ENST00000451282 293 ntBASIC1.81□□□□□ -2.12
KRT3P12035 snoU13.30-201ENST00000458951 104 ntBASIC1.81□□□□□ -2.12
KRT3P12035 snoU13.15-201ENST00000459407 104 ntBASIC1.81□□□□□ -2.12
KRT3P12035 RPL31P58-201ENST00000469001 379 ntBASIC1.81□□□□□ -2.12
KRT3P12035 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.81□□□□□ -2.12
KRT3P12035 AC116337.1-201ENST00000509680 687 ntBASIC1.81□□□□□ -2.12
KRT3P12035 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.81□□□□□ -2.12
KRT3P12035 AC104581.2-201ENST00000572227 430 ntBASIC1.81□□□□□ -2.12
KRT3P12035 AC010928.2-201ENST00000588017 287 ntBASIC1.81□□□□□ -2.12
KRT3P12035 RPL17P51-201ENST00000605218 238 ntBASIC1.81□□□□□ -2.12
KRT3P12035 AC083806.3-201ENST00000614016 455 ntBASIC1.81□□□□□ -2.12
KRT3P12035 RNU1-76P-201ENST00000362903 159 ntBASIC1.8□□□□□ -2.12
KRT3P12035 Y_RNA.332-201ENST00000365271 113 ntBASIC1.8□□□□□ -2.12
KRT3P12035 RPL37P10-201ENST00000412884 288 ntBASIC1.8□□□□□ -2.12
KRT3P12035 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.8□□□□□ -2.12
KRT3P12035 RNU7-175P-201ENST00000515915 61 ntBASIC1.8□□□□□ -2.12
KRT3P12035 RRN3P3-201ENST00000549207 578 ntBASIC1.8□□□□□ -2.12
KRT3P12035 AC026470.2-201ENST00000561492 181 ntBASIC1.8□□□□□ -2.12
KRT3P12035 MIR6845-201ENST00000613182 61 ntBASIC1.8□□□□□ -2.12
KRT3P12035 PISRT1.1-201ENST00000616930 107 ntBASIC1.8□□□□□ -2.12
KRT3P12035 SCARNA4-201ENST00000629045 128 ntBASIC1.8□□□□□ -2.12
KRT3P12035 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.8□□□□□ -2.12
KRT3P12035 AL159152.1-201ENST00000635019 2587 ntBASIC1.79□□□□□ -2.12
KRT3P12035 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.79□□□□□ -2.12
KRT3P12035 RNU6-601P-201ENST00000384540 107 ntBASIC1.79□□□□□ -2.12
KRT3P12035 MIR153-2-201ENST00000385225 87 ntBASIC1.79□□□□□ -2.12
KRT3P12035 AL033519.2-201ENST00000403958 392 ntBASIC1.79□□□□□ -2.12
KRT3P12035 RNA5SP501-201ENST00000410990 112 ntBASIC1.79□□□□□ -2.12
KRT3P12035 HMGB1P18-201ENST00000438801 619 ntBASIC1.79□□□□□ -2.12
KRT3P12035 AC016717.1-201ENST00000448918 286 ntBASIC1.79□□□□□ -2.12
KRT3P12035 SNORA25.14-201ENST00000516481 132 ntBASIC1.79□□□□□ -2.12
KRT3P12035 RNU6-295P-201ENST00000516901 104 ntBASIC1.79□□□□□ -2.12
KRT3P12035 AL158827.2-201ENST00000602494 330 ntBASIC1.79□□□□□ -2.12
KRT3P12035 RMST_6.1-201ENST00000611980 203 ntBASIC1.79□□□□□ -2.12
KRT3P12035 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.79□□□□□ -2.12
KRT3P12035 AL691447.3-201ENST00000635020 330 ntBASIC1.79□□□□□ -2.12
KRT3P12035 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRT3P12035 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRT3P12035 RNU6-727P-201ENST00000363592 107 ntBASIC1.78□□□□□ -2.12
KRT3P12035 Y_RNA.319-201ENST00000365138 92 ntBASIC1.78□□□□□ -2.12
KRT3P12035 Y_RNA.405-201ENST00000383979 100 ntBASIC1.78□□□□□ -2.12
KRT3P12035 Y_RNA.451-201ENST00000384200 100 ntBASIC1.78□□□□□ -2.12
KRT3P12035 RNU6-842P-201ENST00000384269 107 ntBASIC1.78□□□□□ -2.12
KRT3P12035 Y_RNA.524-201ENST00000384564 100 ntBASIC1.78□□□□□ -2.12
KRT3P12035 Y_RNA.561-201ENST00000384694 100 ntBASIC1.78□□□□□ -2.12
KRT3P12035 MIR1283-1-201ENST00000408494 87 ntBASIC1.78□□□□□ -2.12
KRT3P12035 RNU6-1050P-201ENST00000410388 107 ntBASIC1.78□□□□□ -2.12
KRT3P12035 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRT3P12035 MTCO3P29-201ENST00000432119 779 ntBASIC1.78□□□□□ -2.12
KRT3P12035 AC007395.1-201ENST00000451333 677 ntBASIC1.78□□□□□ -2.12
KRT3P12035 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.78□□□□□ -2.12
KRT3P12035 RNU7-87P-201ENST00000459343 62 ntBASIC1.78□□□□□ -2.12
KRT3P12035 RPL30P10-201ENST00000488148 337 ntBASIC1.78□□□□□ -2.12
KRT3P12035 AC103851.1-201ENST00000506833 274 ntBASIC1.78□□□□□ -2.12
KRT3P12035 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.78□□□□□ -2.12
KRT3P12035 RNU6-250P-201ENST00000516958 103 ntBASIC1.78□□□□□ -2.12
KRT3P12035 GNAI2P1-201ENST00000541815 315 ntBASIC1.78□□□□□ -2.12
KRT3P12035 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.78□□□□□ -2.12
KRT3P12035 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.78□□□□□ -2.12
KRT3P12035 U1.36-201ENST00000620684 176 ntBASIC1.78□□□□□ -2.12
KRT3P12035 RNU6-845P-201ENST00000362578 103 ntBASIC1.77□□□□□ -2.13
KRT3P12035 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRT3P12035 MIR300-201ENST00000401138 83 ntBASIC1.77□□□□□ -2.13
KRT3P12035 MIR548K-201ENST00000408406 116 ntBASIC1.77□□□□□ -2.13
KRT3P12035 Y_RNA.594-201ENST00000410373 140 ntBASIC1.77□□□□□ -2.13
KRT3P12035 RNU6-1304P-201ENST00000411374 106 ntBASIC1.77□□□□□ -2.13
KRT3P12035 MTCO3P46-201ENST00000425787 232 ntBASIC1.77□□□□□ -2.13
KRT3P12035 AL353997.1-201ENST00000432936 108 ntBASIC1.77□□□□□ -2.13
KRT3P12035 MTND2P29-201ENST00000438595 412 ntBASIC1.77□□□□□ -2.13
KRT3P12035 MTND4P17-201ENST00000470444 350 ntBASIC1.77□□□□□ -2.13
KRT3P12035 RPL7P42-201ENST00000481005 679 ntBASIC1.77□□□□□ -2.13
KRT3P12035 AC097473.1-201ENST00000508142 408 ntBASIC1.77□□□□□ -2.13
KRT3P12035 AC046134.1-201ENST00000514454 666 ntBASIC1.77□□□□□ -2.13
KRT3P12035 RNU6-1016P-201ENST00000516689 94 ntBASIC1.77□□□□□ -2.13
KRT3P12035 RNU6-58P-201ENST00000517143 103 ntBASIC1.77□□□□□ -2.13
KRT3P12035 AL590705.4-201ENST00000532209 134 ntBASIC1.77□□□□□ -2.13
KRT3P12035 CBX3P8-201ENST00000532412 525 ntBASIC1.77□□□□□ -2.13
KRT3P12035 UBL5P4-201ENST00000562584 236 ntBASIC1.77□□□□□ -2.13
KRT3P12035 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.77□□□□□ -2.13
KRT3P12035 AC011494.1-201ENST00000596454 237 ntBASIC1.77□□□□□ -2.13
KRT3P12035 AC009229.3-201ENST00000608056 282 ntBASIC1.77□□□□□ -2.13
KRT3P12035 MIR8081-201ENST00000611533 95 ntBASIC1.77□□□□□ -2.13
KRT3P12035 ZNF299P-201ENST00000406845 1804 ntBASIC1.77□□□□□ -2.13
KRT3P12035 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRT3P12035 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRT3P12035 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRT3P12035 U8.10-201ENST00000384260 133 ntBASIC1.76□□□□□ -2.13
KRT3P12035 RNU6-331P-201ENST00000384724 107 ntBASIC1.76□□□□□ -2.13
KRT3P12035 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
KRT3P12035 AC004866.1-201ENST00000411748 78 ntBASIC1.76□□□□□ -2.13
KRT3P12035 RPS26P42-201ENST00000413485 326 ntBASIC1.76□□□□□ -2.13
KRT3P12035 RPL21P111-201ENST00000418453 477 ntBASIC1.76□□□□□ -2.13
KRT3P12035 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.76□□□□□ -2.13
KRT3P12035 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms