Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNA5SP216-201ENST00000516111 123 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 RNU6-703P-201ENST00000516946 107 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 AC022022.2-201ENST00000602989 360 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 AC004067.1-201ENST00000608733 700 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 MIR7107-201ENST00000611489 80 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 RNU6-658P-201ENST00000384606 106 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 MTATP6P27-201ENST00000416987 621 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 AC009646.1-201ENST00000510455 318 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 SNORA18.7-201ENST00000516910 131 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 AC006380.1-201ENST00000603598 186 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 AL671309.1-201ENST00000603750 544 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 AP002802.2-201ENST00000605877 235 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 FRG1KP-201ENST00000623592 341 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 AC093726.3-201ENST00000637588 150 ntBASIC-1.81□□□□□ -2.7
TOP2AP11388 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.82□□□□□ -2.7
TOP2AP11388 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.82□□□□□ -2.7
TOP2AP11388 USP9YP22-201ENST00000438971 294 ntBASIC-1.82□□□□□ -2.7
TOP2AP11388 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-1.82□□□□□ -2.7
TOP2AP11388 AL133217.1-201ENST00000450980 425 ntBASIC-1.82□□□□□ -2.7
TOP2AP11388 MTCO3P28-201ENST00000513351 515 ntBASIC-1.82□□□□□ -2.7
TOP2AP11388 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-1.82□□□□□ -2.7
TOP2AP11388 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.82□□□□□ -2.7
TOP2AP11388 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-1.82□□□□□ -2.7
TOP2AP11388 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-1.82□□□□□ -2.7
TOP2AP11388 AC104820.1-201ENST00000624183 307 ntBASIC-1.82□□□□□ -2.7
TOP2AP11388 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.83□□□□□ -2.7
TOP2AP11388 RNU6-1097P-201ENST00000363586 107 ntBASIC-1.83□□□□□ -2.7
TOP2AP11388 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.83□□□□□ -2.7
TOP2AP11388 RNU6-47P-201ENST00000383866 107 ntBASIC-1.83□□□□□ -2.7
TOP2AP11388 MIR649-201ENST00000384843 97 ntBASIC-1.83□□□□□ -2.7
TOP2AP11388 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.83□□□□□ -2.7
TOP2AP11388 AC063943.3-201ENST00000615562 356 ntBASIC-1.83□□□□□ -2.7
TOP2AP11388 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.83□□□□□ -2.7
TOP2AP11388 AL513423.1-201ENST00000621695 132 ntBASIC-1.83□□□□□ -2.7
TOP2AP11388 RNU6-1010P-201ENST00000362757 107 ntBASIC-1.84□□□□□ -2.7
TOP2AP11388 ELOCP14-201ENST00000428070 331 ntBASIC-1.84□□□□□ -2.7
TOP2AP11388 ELOCP7-201ENST00000439968 331 ntBASIC-1.84□□□□□ -2.7
TOP2AP11388 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-1.84□□□□□ -2.7
TOP2AP11388 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.85□□□□□ -2.71
TOP2AP11388 SNORA72.1-201ENST00000363485 129 ntBASIC-1.85□□□□□ -2.71
TOP2AP11388 SNORA2B-201ENST00000384583 137 ntBASIC-1.85□□□□□ -2.71
TOP2AP11388 MIR501-201ENST00000390204 84 ntBASIC-1.85□□□□□ -2.71
TOP2AP11388 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.85□□□□□ -2.71
TOP2AP11388 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-1.85□□□□□ -2.71
TOP2AP11388 DEFB130C-202ENST00000530001 230 ntBASIC-1.85□□□□□ -2.71
TOP2AP11388 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-1.85□□□□□ -2.71
TOP2AP11388 AC078795.3-201ENST00000602913 472 ntBASIC-1.85□□□□□ -2.71
TOP2AP11388 AL355598.1-201ENST00000604169 202 ntBASIC-1.85□□□□□ -2.71
TOP2AP11388 DLEU2_6.3-201ENST00000340052 136 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 SNORA81-201ENST00000408493 178 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 TAF13P2-201ENST00000416876 286 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 AL365184.2-201ENST00000431139 435 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 MTND4P15-201ENST00000437913 1033 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 DLEU2_6.2-201ENST00000620994 136 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 AC099786.3-201ENST00000565735 1410 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 RNU6-655P-201ENST00000362858 107 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 MIR301A-201ENST00000385261 86 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 AL590002.1-201ENST00000406554 418 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-1.86□□□□□ -2.71
TOP2AP11388 FAM204CP-201ENST00000424489 642 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.86□□□□□ -2.71
TOP2AP11388 AL353752.1-201ENST00000454946 260 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.86□□□□□ -2.71
TOP2AP11388 AC133485.4-201ENST00000561835 220 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 AC140658.3-201ENST00000567603 271 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 MIR4804-201ENST00000581683 73 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 AC011451.2-201ENST00000604303 598 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 AP000676.3-201ENST00000623299 569 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-1.86□□□□□ -2.71
TOP2AP11388 MIR1246-201ENST00000636535 73 ntBASIC-1.86□□□□□ -2.71
TOP2AP11388 RNY4P27-201ENST00000363341 96 ntBASIC-1.87□□□□□ -2.71
TOP2AP11388 MIR660-201ENST00000385235 97 ntBASIC-1.87□□□□□ -2.71
TOP2AP11388 MT-TY-201ENST00000387409 66 ntBASIC-1.87□□□□□ -2.71
TOP2AP11388 SNORA75.1-201ENST00000391130 148 ntBASIC-1.87□□□□□ -2.71
TOP2AP11388 SNRPEP8-201ENST00000442866 260 ntBASIC-1.87□□□□□ -2.71
TOP2AP11388 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-1.87□□□□□ -2.71
TOP2AP11388 AC013476.2-201ENST00000614456 459 ntBASIC-1.87□□□□□ -2.71
TOP2AP11388 RNA5SP117-201ENST00000365294 118 ntBASIC-1.88□□□□□ -2.71
TOP2AP11388 RNU2-15P-201ENST00000410692 191 ntBASIC-1.88□□□□□ -2.71
TOP2AP11388 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.88□□□□□ -2.71
TOP2AP11388 RNU6-202P-201ENST00000515998 96 ntBASIC-1.88□□□□□ -2.71
TOP2AP11388 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.88□□□□□ -2.71
TOP2AP11388 AC093519.1-201ENST00000566109 298 ntBASIC-1.88□□□□□ -2.71
TOP2AP11388 MIR4778-201ENST00000577635 80 ntBASIC-1.88□□□□□ -2.71
TOP2AP11388 AC007684.1-201ENST00000609671 477 ntBASIC-1.88□□□□□ -2.71
TOP2AP11388 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-1.88□□□□□ -2.71
TOP2AP11388 RNU6-1210P-201ENST00000363775 107 ntBASIC-1.89□□□□□ -2.71
TOP2AP11388 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-1.89□□□□□ -2.71
TOP2AP11388 RNU6-63P-201ENST00000516690 95 ntBASIC-1.89□□□□□ -2.71
TOP2AP11388 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-1.89□□□□□ -2.71
TOP2AP11388 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.89□□□□□ -2.71
TOP2AP11388 AL390123.1-201ENST00000603216 237 ntBASIC-1.89□□□□□ -2.71
TOP2AP11388 AC122133.1-201ENST00000613964 233 ntBASIC-1.89□□□□□ -2.71
TOP2AP11388 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.9□□□□□ -2.71
TOP2AP11388 snoU2_19.1-201ENST00000362361 80 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms